RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 ALKBH1Q13686 389 aaKnown RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 CD276Q5ZPR3 534 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 FAM71E1Q6IPT2 247 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TMEM81Q6P7N7 255 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 MISPQ8IVT2 679 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ATOH1Q92858 354 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 CPNE4Q96A23 557 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 TBC1D20Q96BZ9 403 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 CASD1Q96PB1 797 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SRRQ9GZT4 340 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 FN3KRPQ9HA64 309 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ZNF629Q9UEG4 869 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 RARRES3Q9UL19 164 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 COA3Q9Y2R0 106 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 PRSS38A1L453 326 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 AGAP14A8MT82 685 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TRIM77I1YAP6 450 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ZNF250P15622 560 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 DSC1Q08554 894 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ARL16Q0P5N6 197 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 AGERQ15109 404 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 AADACL3Q5VUY0 350 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 NKAIN2Q5VXU1 208 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 WBP2NLQ6ICG8 309 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 VHLLQ6RSH7 139 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 GLIPR1L1Q6UWM5 242 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 OR4S1Q8NGB4 309 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 PPP1R35Q8TAP8 253 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 KCNJ15Q99712 375 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SPIN2AQ99865 258 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SPIN2BQ9BPZ2 258 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ULBP2Q9BZM5 246 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SPHK1Q9NYA1 384 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 OSGIN2Q9Y236 505 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 A0A1W2PR48 441 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 OR5K4A6NMS3 321 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SYT5O00445 386 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 MAN2B1O00754 1011 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 CLDN1O95832 211 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TK1P04183 234 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 RAB5CP51148 216 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 CSNK1G2P78368 415 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SNTB1Q13884 538 aaKnown RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 MPPED2Q15777 294 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 OR2B11Q5JQS5 317 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ATPAF1Q5TC12 328 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 TMEM71Q6P5X7 295 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TMEM182Q6ZP80 229 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 KIAA1958Q8N8K9 716 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 OR5L2Q8NGL0 311 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TANKQ92844 425 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 YIPF6Q96EC8 236 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 PLAC1Q9HBJ0 212 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SLC5A10A0PJK1 596 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ASPDHA6ND91 283 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 ZNF724A8MTY0 619 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TARM1B6A8C7 271 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 PHOX2AO14813 284 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SUSD5O60279 629 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 GUSBP08236 651 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 CTSAP10619 480 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 NQO2P16083 231 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 NAT1P18440 290 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TGM1P22735 817 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 G0S2P27469 103 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 CLDN17P56750 224 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 UBE2NP61088 152 aaKnown RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 NAA40Q86UY6 237 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 SLC43A2Q8N370 569 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 CCNL2Q96S94 520 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 SLC19A3Q9BZV2 496 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 MAGT1Q9H0U3 335 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 PLK3Q9H4B4 646 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 PRSS16Q9NQE7 514 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TAS2R4Q9NYW5 299 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 NPAP1Q9NZP6 1156 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 TMEFF2Q9UIK5 374 aaPredicted RBP7.98□□□□□ -1.13
RTN3-202ENST00000339997 HCFC2Q9Y5Z7 792 aa7.98□□□□□ -1.13
RTN3-202ENST00000339997 D6RAR5 112 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 H3BP45 60 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 SEMG1P04279 462 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 GLAP06280 429 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ADRB1P08588 477 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 DPP4P27487 766 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 EFNA3P52797 238 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 LIM2P55344 173 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 CARD18P57730 90 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 HABP2Q14520 560 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 PDLIM3Q53GG5 364 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 ZNF813Q6ZN06 617 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 LIPHQ8WWY8 451 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 FBXW5Q969U6 566 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ZG16BQ96DA0 208 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TOE1Q96GM8 510 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 NIPSNAP3BQ9BS92 247 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 SPNS1Q9H2V7 528 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TAF9BQ9HBM6 251 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 DNAJB11Q9UBS4 358 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms