RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 RXFP3Q9NSD7 469 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 C14orf166Q9Y224 244 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 MANBAO00462 879 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LCATP04180 440 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 THY1P04216 161 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SMIM17P0DL12 118 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ADAM8P78325 824 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 KIAA0040Q15053 153 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RAB35Q15286 201 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ELAVL1Q15717 326 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PRTGQ2VWP7 1150 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LINC00303Q3SY05 128 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GTF2H5Q6ZYL4 71 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 CEACAM19Q7Z692 300 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF280BQ86YH2 543 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 COX18Q8N8Q8 333 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR10G4Q8NGN3 311 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF596Q8TC21 504 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TMED6Q8WW62 240 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GTPBP3Q969Y2 492 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LAT2Q9GZY6 243 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR52D1Q9H346 318 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TUBB1Q9H4B7 451 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PEF1Q9UBV8 284 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 KIF1BO60333 1816 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TRBV6-7A0A0A0MS04 114 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PPE2 198 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PQ45 241 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PQY0 241 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF354AO60765 605 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 FCGR3AP08637 254 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 XCR1P46094 333 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 AGTR2P50052 363 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RAC3P60763 192 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RPS23P62266 143 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GINS1Q14691 196 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM176BQ3YBM2 270 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 KCNIP4Q6PIL6 250 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 VHLLQ6RSH7 139 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF620Q6ZNG0 422 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LRRC69Q6ZNQ3 347 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 FAM58AQ8N1B3 248 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ACOT4Q8N9L9 421 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR52M1Q8NGK5 317 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PSMF1Q92530 271 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 VOPP1Q96AW1 172 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 FBXO17Q96EF6 278 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 MAGT1Q9H0U3 335 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 BCAS3Q9H6U6 928 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM134Q9H6X4 195 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SGK2Q9HBY8 427 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LTB4R2Q9NPC1 389 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM9BQ9NQ34 198 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PDLIM7Q9NR12 457 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 NAT8Q9UHE5 227 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 MRPS28Q9Y2Q9 187 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 YIPF1Q9Y548 306 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RGPD1P0DJD0 1748 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TRBV24-1A0A075B6N3 115 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PPE3 182 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 IGSF6O95976 241 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LIPFP07098 398 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GZMBP10144 247 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RPS4Y1P22090 263 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SHC1P29353 583 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ELLP55199 621 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 IRF8Q02556 426 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PPP1R8Q12972 351 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 CTBP1Q13363 440 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TCEAL5Q5H9L2 206 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM225Q6GV28 225 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PRSS54Q6PEW0 395 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TOMM20LQ6UXN7 152 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF765Q7L2R6 523 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GPSM1Q86YR5 675 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR51A2Q8NGJ7 313 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR52J3Q8NH60 311 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR4S2Q8NH73 311 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 CXorf40AQ8TE69 158 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 FAM3CQ92520 227 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 MUCL1Q96DR8 90 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TGM7Q96PF1 710 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 CD180Q99467 661 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 NMES1Q9C002 83 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RBKSQ9H477 322 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GPATCH2Q9NW75 528 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TAS2R16Q9NYV7 291 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ST3GAL6Q9Y274 331 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 IGHV2-70DA0A0C4DH43 119 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1W2PS29 197 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TRBC2A0A5B9 178 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 DAPL1A0PJW8 107 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 DIRAS1O95057 198 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TRGC1P0CF51 173 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF286BP0CG31 522 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ACRP10323 421 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ANOS1P23352 680 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 AK4P27144 223 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PNLIPRP1P54315 467 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 GPR18Q14330 331 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms