RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 KIF26BQ2KJY2 2108 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 ANAPC1Q9H1A4 1944 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 PLSCR5A0PG75 271 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 ADH1BP00325 375 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 CA3P07451 260 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 CELA2BP08218 269 aaPredicted RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 DPP4P27487 766 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 PRPS1P60891 318 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 TMEM200AQ86VY9 491 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 SYS1Q8N2H4 156 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 GALNT16Q8N428 558 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 ASB16Q96NS5 453 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 FAM60AQ9NP50 221 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 KIF25Q9UIL4 384 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 VDAC3Q9Y277 283 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 HOXB5P09067 269 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 ATP1B3P54709 279 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 PSG6Q00889 435 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 HHEXQ03014 270 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 CHAF1BQ13112 559 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 BVESQ8NE79 360 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 OR51A2Q8NGJ7 313 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 TAS2R8Q9NYW2 309 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 THAP10Q9P2Z0 257 aaPredicted RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 TBX21Q9UL17 535 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 B9D1Q9UPM9 204 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 P2RY10O00398 339 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 OGG1O15527 345 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 KCNJ13O60928 360 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 RNH1P13489 461 aaKnown RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF273Q14593 569 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 CLVS2Q5SYC1 327 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 TMEM71Q6P5X7 295 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ETFBKMTQ8IXQ9 262 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 G6PC3Q9BUM1 346 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 M0R036 132 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 PTP4A3O75365 173 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 S100A9P06702 114 aaKnown RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 GLULP15104 373 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 RIDAP52758 137 aaKnown RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ACTBP60709 375 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ACTG1P63261 375 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 EIF2B5Q13144 721 aaKnown RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 NHLRC3Q5JS37 347 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF585AQ6P3V2 769 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 SLC25A28Q96A46 364 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 OR10A5Q9H207 317 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 FAM96BQ9Y3D0 163 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 OIP5O43482 229 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 MPIG6BO95866 241 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 TIMP1P01033 207 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ITGA5P08648 1049 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 HTR2CP28335 458 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 OR3A2P47893 321 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 PRICKLE4Q2TBC4 344 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF658BQ4V348 819 aaPredicted RBP12.84□□□□□ -0.35
PCDH8-201ENST00000338862 WDR38Q5JTN6 314 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF425Q6IV72 752 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 TRAPPC6BQ86SZ2 158 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 OR13C9Q8NGT0 318 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 EMC6Q9BV81 110 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 CHRNA9Q9UGM1 479 aa12.84□□□□□ -0.35
PCDH8-201ENST00000338862 ALPK3Q96L96 1907 aa12.83□□□□□ -0.35
PCDH8-201ENST00000338862 METTL21EPA6NDL7 271 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 GIMD1P0DJR0 217 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 ZP2Q05996 745 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 FGL1Q08830 312 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 SLC22A6Q4U2R8 563 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF660Q6AZW8 331 aaPredicted RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 LPAR4Q99677 370 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 MED19A0JLT2 244 aaPredicted RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 TO15178 435 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 SRPX2O60687 465 aaPredicted RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 CTAG2O75638 210 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 NPY4RP50391 375 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 ADPRHP54922 357 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 KIR2DS3Q14952 304 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 UBXN2BQ14CS0 331 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 RGS7BPQ6MZT1 257 aaPredicted RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 H3F3CQ6NXT2 135 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 FAM71CQ8NEG0 241 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 CCDC74AQ96AQ1 378 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 DHCR7Q9UBM7 475 aaKnown RBP12.83□□□□□ -0.36
PCDH8-201ENST00000338862 FBXL21Q9UKT6 434 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF208O43345 1280 aa12.83□□□□□ -0.36
PCDH8-201ENST00000338862 AK1P00568 194 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms