RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 H7C1C5 153 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 RAB36O95755 333 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 SERPINA5P05154 406 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 NR4A1P22736 598 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 RRM2P31350 389 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 MAGEA2P43356 314 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 LCN6P62502 163 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 TRIM25Q14258 630 aaKnown RBP13.18□□□□□ -0.3
PRKN-201ENST00000338468 EFNB3Q15768 340 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 ETFDHQ16134 617 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 THEM4Q5T1C6 240 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 FOXL2NBQ6ZUU3 175 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 ZDHHC21Q8IVQ6 265 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 MCUR1Q96AQ8 359 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
PRKN-201ENST00000338468 GPX7Q96SL4 187 aaPredicted RBP13.18□□□□□ -0.3
PRKN-201ENST00000338468 SIAEQ9HAT2 523 aa13.18□□□□□ -0.3
PRKN-201ENST00000338468 PRPF19Q9UMS4 504 aaKnown RBP13.18□□□□□ -0.3
PRKN-201ENST00000338468 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 A6NIZ1 184 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 IMPA2O14732 288 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 GPRIN2O60269 458 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 MGRN1O60291 552 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 UBOX5O94941 541 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 NDUFB2O95178 105 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
PRKN-201ENST00000338468 SCG5P05408 212 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 IGFBP1P08833 259 aaPredicted RBP13.17□□□□□ -0.3
PRKN-201ENST00000338468 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
PRKN-201ENST00000338468 SMIM11AP58511 58 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 RAP1BP61224 184 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 RAP1AP62834 184 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 SNTB2Q13425 540 aaKnown RBP13.17□□□□□ -0.3
PRKN-201ENST00000338468 DAG1Q14118 895 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 MTX3Q5HYI7 312 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 SLC16A14Q7RTX9 510 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 LRRC18Q8N456 261 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 PAQR4Q8N4S7 273 aaPredicted RBP13.17□□□□□ -0.3
PRKN-201ENST00000338468 RASD2Q96D21 266 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 PLK3Q9H4B4 646 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 BARX1Q9HBU1 254 aaPredicted RBP13.17□□□□□ -0.3
PRKN-201ENST00000338468 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 IL20RAQ9UHF4 553 aa13.17□□□□□ -0.3
PRKN-201ENST00000338468 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 B9A039 149 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 ACOT8O14734 319 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 SSX4O60224 188 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 ENTPD5O75356 428 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 HMGA2P52926 109 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 CHRNB3Q05901 458 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 SLC36A2Q495M3 483 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 DPPA2Q7Z7J5 298 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 DHFR2Q86XF0 187 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 OR4C15Q8NGM1 316 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 RBP7Q96R05 134 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 DOK1Q99704 481 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 VNN3Q9NY84 501 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 AURKCQ9UQB9 309 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
PRKN-201ENST00000338468 MXRA5Q9NR99 2828 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 TEX13CA0A0J9YWL9 993 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 PRSS37A4D1T9 235 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 LY6HO94772 140 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 NR2C1P13056 603 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 CCL2P13500 99 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 NPR2P20594 1047 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 FPR3P25089 353 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 LAP3P28838 519 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 SDHAP31040 664 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 GSSP48637 474 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 KRR1Q13601 381 aaKnown RBP13.15□□□□□ -0.3
PRKN-201ENST00000338468 RAB35Q15286 201 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 SGCAQ16586 387 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 FAM27BQ5VT28 67 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 C1orf94Q6P1W5 598 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 TMEM53Q6P2H8 277 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 DPY19L2P2Q6ZN68 376 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 PTCHD4Q6ZW05 846 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 SVOPLQ8N434 492 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 CPEB3Q8NE35 698 aaKnown RBP13.15□□□□□ -0.3
PRKN-201ENST00000338468 SLC30A7Q8NEW0 376 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 OR10H5Q8NGA6 315 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 FNDC8Q8TC99 324 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 CCDC124Q96CT7 223 aaKnown RBP13.15□□□□□ -0.3
PRKN-201ENST00000338468 SLC7A6OSQ96CW6 309 aaPredicted RBP13.15□□□□□ -0.3
PRKN-201ENST00000338468 ASB9Q96DX5 294 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 THTPAQ9BU02 230 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 RNF121Q9H920 327 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 KRCC1Q9NPI7 259 aaPredicted RBP13.15□□□□□ -0.3
PRKN-201ENST00000338468 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms