RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NAGAP17050 411 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 TGM1P22735 817 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 D2HGDHQ8N465 521 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 MFSD4AQ8N468 514 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF321PQ8N8H1 164 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ACBD4Q8NC06 268 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SMIM19Q96E16 107 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PRSS27Q9BQR3 290 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 DTX4Q9Y2E6 619 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CENPVL1A0A0U1RR11 272 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 GPR171O14626 319 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 VEGFCP49767 419 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF407Q9C0G0 2248 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 DOCK9Q9BZ29 2069 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM265A0A087WTH1 108 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 BHLHE40O14503 412 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 SC5DO75845 299 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF136P52737 540 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 UBE2NP61088 152 aaKnown RBP5.71□□□□□ -1.49
PRKDC-202ENST00000338368 EGR3Q06889 387 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 GPR176Q14439 515 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 LAIR2Q6ISS4 152 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 CORO6Q6QEF8 472 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 RAB11FIP2Q7L804 512 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 BPHLQ86WA6 291 aaPredicted RBP5.71□□□□□ -1.49
PRKDC-202ENST00000338368 PLPP7Q8NBV4 271 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 DNAAF1Q8NEP3 725 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 OR51T1Q8NGJ9 327 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 OR2M2Q96R28 347 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 UBQLN2Q9UHD9 624 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 HTR3BO95264 441 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 SEMG1P04279 462 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 HLA-DMAP28067 261 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 S100A10P60903 97 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 CD226Q15762 336 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF565Q8N9K5 539 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 GPR119Q8TDV5 335 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 TXNIPQ9H3M7 391 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 ERVMER34-1Q9H9K5 563 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 GALNT9Q9HCQ5 603 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 MCTS1Q9ULC4 181 aaKnown RBP5.71□□□□□ -1.49
PRKDC-202ENST00000338368 FAM230AA0A1W2PPH8 454 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 HTR5AP47898 357 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 MALLQ13021 153 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 FCN2Q15485 313 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 SIAH3Q8IW03 269 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 TAAR8Q969N4 342 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 ARL5BQ96KC2 179 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 B9D1Q9UPM9 204 aa5.71□□□□□ -1.49
PRKDC-202ENST00000338368 FABP7O15540 132 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 UBCP0CG48 685 aaKnown RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 THBS2P35442 1172 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 LIMS1P48059 325 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 RSU1Q15404 277 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 PLEKHN1Q494U1 663 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 BEST3Q8N1M1 668 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 TXNDC15Q96J42 360 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 OR51J1Q9H342 316 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SCN1AP35498 2009 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 OR6C68A6NDL8 312 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 HRKO00198 91 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 TP53P04637 393 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 LINC00271P0C7V0 271 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 CCR9P51686 369 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 FUT7Q11130 342 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SLC16A14Q7RTX9 510 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 MRPL21Q7Z2W9 205 aaKnown RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 GRAMD2AQ8IUY3 354 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 GON7Q9BXV9 100 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 APMAPQ9HDC9 416 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 CHST11Q9NPF2 352 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 IFITM5A6NNB3 132 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 PLPP2O43688 288 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SCGB1D2O95969 90 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 S100A9P06702 114 aaKnown RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 GPR85P60893 370 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 HERV-K104P61576 105 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 FGL1Q08830 312 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 DBPQ10586 325 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 C9orf135Q5VTT2 229 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF770Q6IQ21 691 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 LINC00696Q6ZRV3 163 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 TET1Q8NFU7 2136 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 OR56B4Q8NH76 319 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SLA2Q9H6Q3 261 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 E9PI62 339 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 TBX6O95947 436 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 LIPCP11150 499 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 CCL7P80098 99 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 FOXK1P85037 733 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 ASAH1Q13510 395 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SLC17A1Q14916 467 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 CNN3Q15417 329 aaKnown RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SPIN3Q5JUX0 258 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 UBE2NLQ5JXB2 153 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 LIX1LQ8IVB5 337 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 ACAD8Q9UKU7 415 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 TMEM184BQ9Y519 407 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SULT1B1O43704 296 aa5.71□□□□□ -1.5
PRKDC-202ENST00000338368 SERPINA5P05154 406 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms