RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 PCGF3Q3KNV8 242 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 TMEM154Q6P9G4 183 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 THSD4Q6ZMP0 1018 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 USP51Q70EK9 711 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 SNX33Q8WV41 574 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 TMEM239Q8WW34 195 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 RASSF5Q8WWW0 418 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 C11orf40Q8WZ69 217 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 SGTBQ96EQ0 304 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 POM121L2Q96KW2 1035 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 ZNF665Q9H7R5 613 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 SLCO1C1Q9NYB5 712 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 RIMS3Q9UJD0 308 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 GRIP1Q9Y3R0 1128 aa13.59□□□□□ -0.23
MUC1-201ENST00000337604 TANC2Q9HCD6 1990 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 LOC100509620A0A075B734 347 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 TRAV20A0A0B4J274 112 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 NPIPB13A6NJU9 1138 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 HMGB1P1B2RPK0 211 aaPredicted RBP13.58□□□□□ -0.24
MUC1-201ENST00000337604 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 RGS9O75916 674 aaPredicted RBP13.58□□□□□ -0.24
MUC1-201ENST00000337604 PTHP01270 115 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 IGHV3-13P01766 116 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 APLNRP35414 380 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 CRYBB2P43320 205 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 RAD52P43351 418 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 SELENOVP59797 346 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 HSF2Q03933 536 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 PLP2Q04941 152 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 SPATA46Q5T0L3 261 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 OR8J3Q8NGG0 315 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 OR1J2Q8NGS2 313 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 OR1J1Q8NGS3 322 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 SIAEQ9HAT2 523 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 SMURF2Q9HAU4 748 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 WIPI2Q9Y4P8 454 aa13.58□□□□□ -0.24
MUC1-201ENST00000337604 DYSFO75923 2080 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 LOC105371242A0A075B767 164 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 A0A0A6YYJ9 748 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 PNPP00491 289 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 IGHV2-5P01817 119 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 MAKP20794 623 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 STOMP27105 288 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 MMP15P51511 669 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 CD47Q08722 323 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 TOP3AQ13472 1001 aaPredicted RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 CYLC2Q14093 348 aaPredicted RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 LAPTM4AQ15012 233 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 MMEL1Q495T6 779 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 METTL21CQ5VZV1 264 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 FAHD2BQ6P2I3 314 aaPredicted RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 SHQ1Q6PI26 577 aaKnown RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 SLC25A47Q6Q0C1 308 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 RFPL4BQ6ZWI9 263 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 HDDC2Q7Z4H3 204 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 AKR7LQ8NHP1 331 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 IPCEF1Q8WWN9 437 aaPredicted RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 NSMAFQ92636 917 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 LRRC58Q96CX6 371 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 FAHD2AQ96GK7 314 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 MARS2Q96GW9 593 aaKnown RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 ZNF583Q96ND8 569 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 SIKE1Q9BRV8 207 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 TMPRSS13Q9BYE2 586 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 POLR2J2Q9GZM3 115 aaKnown RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 POLR2J3Q9H1A7 115 aaKnown RBP13.57□□□□□ -0.24
MUC1-201ENST00000337604 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 SAP30LQ9HAJ7 183 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 GPR160Q9UJ42 338 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 BAG5Q9UL15 447 aa13.57□□□□□ -0.24
MUC1-201ENST00000337604 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 PLPP2O43688 288 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 MPZL1O95297 269 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 IGHV1-46P01743 117 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 EPHA1P21709 976 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 CCNOP22674 350 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 ZNF81P51508 661 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 ERVK-25P63136 954 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 PSG4Q00888 419 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 TSTQ16762 297 aaKnown RBP13.56□□□□□ -0.24
MUC1-201ENST00000337604 SPRNQ5BIV9 151 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 ACSM5Q6NUN0 579 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 ZFAND2BQ8WV99 257 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 ECSITQ9BQ95 431 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 WNT5BQ9H1J7 359 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 CCNB1IP1Q9NPC3 277 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 HIF3AQ9Y2N7 669 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 MED31Q9Y3C7 131 aa13.56□□□□□ -0.24
MUC1-201ENST00000337604 C5orf49A4QMS7 147 aa13.55□□□□□ -0.24
MUC1-201ENST00000337604 CLDN25C9JDP6 229 aa13.55□□□□□ -0.24
MUC1-201ENST00000337604 MRASO14807 208 aa13.55□□□□□ -0.24
MUC1-201ENST00000337604 IGHMP01871 453 aa13.55□□□□□ -0.24
MUC1-201ENST00000337604 THRBP10828 461 aa13.55□□□□□ -0.24
MUC1-201ENST00000337604 CFPP27918 469 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms