RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 GMNCA6NCL1 334 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 C17orf100A8MU93 164 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 CDC14BO60729 498 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 OR5F1O95221 314 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 SNAP29O95721 258 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TROVE2P10155 538 aaKnown RBP eCLIP9.13□□□□□ -0.95
CAPN3-202ENST00000337571 THRBP10828 461 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF250P15622 560 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 GCH1P30793 250 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 UGT2B15P54855 530 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 CCL8P80075 99 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 CD47Q08722 323 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 PIN1Q13526 163 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-202ENST00000337571 MAPRE2Q15555 327 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 SGCAQ16586 387 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 HIST3H3Q16695 136 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 MSMPQ1L6U9 139 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 ALDH16A1Q8IZ83 802 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TEX29Q8N6K0 151 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 NOXO1Q8NFA2 376 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 OR8J3Q8NGG0 315 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 OR1J1Q8NGS3 322 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 OR51F2Q8NH61 342 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 CLDND2Q8NHS1 167 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TMEM255BQ8WV15 326 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 ASB10Q8WXI3 467 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TMEM186Q96B77 213 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TPD52L3Q96J77 140 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 RBP7Q96R05 134 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TMEM120AQ9BXJ8 343 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 MRPL13Q9BYD1 178 aaKnown RBP9.13□□□□□ -0.95
CAPN3-202ENST00000337571 SIAEQ9HAT2 523 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 LPAR2Q9HBW0 351 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF275Q9NSD4 429 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-202ENST00000337571 HIF1ANQ9NWT6 349 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 TREM2Q9NZC2 230 aa9.13□□□□□ -0.95
CAPN3-202ENST00000337571 MYEF2Q9P2K5 600 aaKnown RBP9.13□□□□□ -0.95
CAPN3-202ENST00000337571 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 PLSCR5A0PG75 271 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 HTR3EA5X5Y0 456 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 BBIP1A8MTZ0 92 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 FBP2O00757 339 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 TRMUO75648 421 aaKnown RBP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 CLPTM1O96005 669 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 IGF2P01344 180 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 MSMBP08118 114 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 STOMP27105 288 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 AQP2P41181 271 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 CRYBB2P43320 205 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 MAGEB1P43366 347 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 OR1E2P47887 323 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 GZMMP51124 257 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 ARFIP2P53365 341 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 RUNX1T1Q06455 604 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 ST3GAL3Q11203 375 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 HFEQ30201 348 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF718Q3SXZ3 478 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 CYBRD1Q53TN4 286 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 COQ5Q5HYK3 327 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 PABPC1L2AQ5JQF8 200 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 ACSM5Q6NUN0 579 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 FAHD2BQ6P2I3 314 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 TSPYL5Q86VY4 417 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 NKAIN4Q8IVV8 208 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 C1orf174Q8IYL3 243 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 PAQR4Q8N4S7 273 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 PFN4Q8NHR9 129 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 FNDC8Q8TC99 324 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 C10orf82Q8WW14 230 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 LZICQ8WZA0 190 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 NSMAFQ92636 917 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 YIPF5Q969M3 257 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 ITPKCQ96DU7 683 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 FAHD2AQ96GK7 314 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 TIMD4Q96H15 378 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 LRRC37BQ96QE4 947 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 METTL17Q9H7H0 456 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 SMURF2Q9HAU4 748 aa9.12□□□□□ -0.95
CAPN3-202ENST00000337571 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.12□□□□□ -0.95
CAPN3-202ENST00000337571 IGLV3-9A0A075B6K5 115 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 TRAV20A0A0B4J274 112 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 IGHV1-69-2A0A0G2JMI3 117 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 LOC100653049A0A140TA62 436 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 MRASO14807 208 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 KRT34O76011 436 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 GAAP10253 952 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 TNFRSF1BP20333 461 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 GDI2P50395 445 aaKnown RBP9.11□□□□□ -0.95
CAPN3-202ENST00000337571 SELENOWP63302 87 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 MRPS34P82930 218 aaKnown RBP9.11□□□□□ -0.95
CAPN3-202ENST00000337571 MVKQ03426 396 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 KLF10Q13118 480 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 TAF11Q15544 211 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 TSTQ16762 297 aaKnown RBP9.11□□□□□ -0.95
CAPN3-202ENST00000337571 LRRC23Q53EV4 343 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-202ENST00000337571 ALG10Q5BKT4 473 aa9.11□□□□□ -0.95
CAPN3-202ENST00000337571 THEM4Q5T1C6 240 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms