RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SPI1P17947 270 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 LAP3P28838 519 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 HOXC12P31275 282 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PYCR1P32322 319 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 GGT2P36268 569 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PEX19P40855 299 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PTDSS1P48651 473 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 CDC42P60953 191 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 UBE2NP61088 152 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 TIMM23BQ5SRD1 257 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 MEX3BQ6ZN04 569 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 FOXL2NBQ6ZUU3 175 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 C22orf34Q6ZV56 151 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF627Q7L945 461 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 P2RY8Q86VZ1 359 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 CPOQ8IVL8 374 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 GLB1L2Q8IW92 636 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 TCEANCQ8N8B7 351 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 WDR31Q8NA23 367 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PROKR2Q8NFJ6 384 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 FAM81AQ8TBF8 368 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 HSD17B8Q92506 261 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PTP4A1Q93096 173 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZC3HAV1LQ96H79 300 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 BOD1Q96IK1 185 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PSMG3-AS1Q96PY0 264 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 IL4I1Q96RQ9 567 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 HCAR1Q9BXC0 346 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 NMNAT2Q9BZQ4 307 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 RACGAP1Q9H0H5 632 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 VCX3BQ9H321 246 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 HINT3Q9NQE9 182 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 NDRG4Q9ULP0 352 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 GMPPBQ9Y5P6 360 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC16A6O15403 523 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 GPANK1O95872 356 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 SCG5P05408 212 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 IGFBP2P18065 325 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 NPR2P20594 1047 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 KIR2DL3P43628 341 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 CAPZA2P47755 286 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 TUBA1BP68363 451 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 TUBA4AP68366 448 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 EFNB1P98172 346 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 TAB1Q15750 504 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 SP5Q6BEB4 398 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 TUBA1AQ71U36 451 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 CXXC5Q7LFL8 322 aaKnown RBP12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 DMRTC2Q8IXT2 367 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 LRRC18Q8N456 261 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 DHRSXQ8N5I4 330 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR51L1Q8NGJ5 315 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNRF4Q8WWF5 429 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 CYGBQ8WWM9 190 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 MUCL1Q96DR8 90 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 PITX2Q99697 317 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR51V1Q9H2C8 321 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 POLE4Q9NR33 117 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 IMPAD1Q9NX62 359 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 AMDHD2Q9Y303 409 aa12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
APOBEC3B-202ENST00000335760 ARPC4-TTLL3A0A0A6YYG9 625 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 MPZL1O95297 269 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 THBDP07204 575 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 MSR1P21757 451 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 GLO1Q04760 184 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 PPA1Q15181 289 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 NRN1LQ496H8 165 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 KLHL12Q53G59 568 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 OTPQ5XKR4 325 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC16A14Q7RTX9 510 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 BBS1Q8NFJ9 593 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR6K6Q8NGW6 343 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 TMEM163Q8TC26 289 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 C11orf40Q8WZ69 217 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 UBE2FQ969M7 185 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 DACH2Q96NX9 599 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 SPOCK3Q9BQ16 436 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 KCNN2Q9H2S1 579 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 EMC7Q9NPA0 242 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 CRIM1Q9NZV1 1036 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC25A15Q9Y619 301 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 BAHCC1Q9P281 2608 aa12.31□□□□□ -0.44
APOBEC3B-202ENST00000335760 WNT11O96014 354 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms