RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 DMRTC2Q8IXT2 367 aaPredicted RBP12.59□□□□□ -0.39
SF1-202ENST00000334944 CMTM4Q8IZR5 234 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 ZNF511Q8NB15 262 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 MOGAT1Q96PD6 335 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 RSRP1Q9BUV0 290 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 RTN4RQ9BZR6 473 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 ATXN7L1Q9ULK2 861 aaPredicted RBP12.59□□□□□ -0.39
SF1-202ENST00000334944 PCDHB10Q9UN67 800 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 MRPS33Q9Y291 106 aaKnown RBP12.59□□□□□ -0.39
SF1-202ENST00000334944 MTCH2Q9Y6C9 303 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 SERINC4A6NH21 518 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 SLC25A12O75746 678 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 CD1CP29017 333 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 CALCRP30988 508 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 AQP2P41181 271 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 PPT1P50897 306 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 CLINT1Q14677 625 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 TMEM71Q6P5X7 295 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 C3orf49Q96BT1 292 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 Q96M85 177 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 FOXN4Q96NZ1 517 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 ADOQ96SZ5 270 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 ELF4Q99607 663 aaPredicted RBP12.58□□□□□ -0.39
SF1-202ENST00000334944 FOXQ1Q9C009 403 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 FKRPQ9H9S5 495 aa12.58□□□□□ -0.39
SF1-202ENST00000334944 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.58□□□□□ -0.39
SF1-202ENST00000334944 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 IGHV1OR15-9A0A0B4J2B8 117 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 TMEM218A2RU14 115 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 SNAPINO95295 136 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 S100A6P06703 90 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 CNR1P21554 472 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 BDKRB2P30411 391 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 BLKP51451 505 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 NAXDQ8IW45 347 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 SNX33Q8WV41 574 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 PGLYRP3Q96LB9 341 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 OR14A2Q96R54 314 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 MESP1Q9BRJ9 268 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 ZNF426Q9BUY5 554 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 NXF5Q9H1B4 397 aaKnown RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 BARX1Q9HBU1 254 aaPredicted RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 MKKSQ9NPJ1 570 aaPredicted RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 AKAP7Q9P0M2 348 aaPredicted RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 CHRNA9Q9UGM1 479 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 RPP14O95059 124 aaKnown RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 NDUFB2O95178 105 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 GPANK1O95872 356 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 IFNA4P05014 189 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 CCR5P51681 352 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 RAG2P55895 527 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 ACSM1Q08AH1 577 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 SMCO1Q147U7 214 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 C1orf189Q5VU69 101 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 NAA40Q86UY6 237 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 SVBPQ8N300 66 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 SMIM4Q8WVI0 70 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 PELI1Q96FA3 418 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
SF1-202ENST00000334944 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
SF1-202ENST00000334944 MED12Q93074 2177 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 OR2A4O95047 310 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 FARS2O95363 451 aaKnown RBP12.57□□□□□ -0.4
SF1-202ENST00000334944 ODF4Q2M2E3 257 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 Q3ZCU0 254 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 VWA2Q5GFL6 755 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 LRRTM1Q86UE6 522 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 RHOVQ96L33 236 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 OR2A7Q96R45 310 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 SLC25A18Q9H1K4 315 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 GPN3Q9UHW5 284 aaPredicted RBP12.57□□□□□ -0.4
SF1-202ENST00000334944 MEIS3P1A6NDR6 274 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 PRR32B1ATL7 298 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 IFNGP01579 166 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 ART1P52961 327 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 OR1D5P58170 312 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
SF1-202ENST00000334944 ZNF124Q15973 351 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 STPG1Q5TH74 334 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 ZNF626Q68DY1 528 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 RAB12Q6IQ22 244 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 RPL13AP3Q6NVV1 102 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 ARHGAP11AQ6P4F7 1023 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 OR2W3Q7Z3T1 314 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 SPAG16Q8N0X2 631 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 PNPLA2Q96AD5 504 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 TCTN2Q96GX1 697 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 PFDN5Q99471 154 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 SRA1Q9HD15 236 aaKnown RBP12.57□□□□□ -0.4
SF1-202ENST00000334944 ASH2LQ9UBL3 628 aa12.57□□□□□ -0.4
SF1-202ENST00000334944 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
SF1-202ENST00000334944 F5H5P2 479 aa12.56□□□□□ -0.4
SF1-202ENST00000334944 NPIPB9F8W1W9 429 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms