RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ASPHD2Q6ICH7 369 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LCN10Q6JVE6 187 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LIX1LQ8IVB5 337 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 SPEM1Q8N4L4 309 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 OR2I1PQ8NGU4 316 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 PCNPQ8WW12 178 aaKnown RBP17.01■□□□□ 0.31
RFTN1-201ENST00000334133 MIB2Q96AX9 1013 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 DXOO77932 396 aaKnown RBP17.01■□□□□ 0.31
RFTN1-201ENST00000334133 ANXA3P12429 323 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 SNTA1Q13424 505 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LINC00303Q3SY05 128 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 NKAIN1Q4KMZ8 207 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 HYLS1Q96M11 299 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 OR2M2Q96R28 347 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 GON7Q9BXV9 100 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 C12orf10Q9HB07 376 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 ING4Q9UNL4 249 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LOC101059948A0A1B0GTJ6 334 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 CTDSPLO15194 276 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LMX1BO60663 402 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 ZP1P60852 638 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 POU3F1Q03052 451 aaPredicted RBP17.01■□□□□ 0.31
RFTN1-201ENST00000334133 DYRK1AQ13627 763 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 SLC18B1Q6NT16 456 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LRFN4Q6PJG9 635 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 BAIAP2L2Q6UXY1 529 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 ANKRD37Q7Z713 158 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 OR8H1Q8NGG4 311 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 OR56B4Q8NH76 319 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 DNASE2BQ8WZ79 361 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 CGGBP1Q9UFW8 167 aaPredicted RBP17.01■□□□□ 0.31
RFTN1-201ENST00000334133 EMC9Q9Y3B6 208 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 LRP12Q9Y561 859 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 MT-ATP6P00846 226 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 PSMB1P20618 241 aaKnown RBP17■□□□□ 0.31
RFTN1-201ENST00000334133 CXCL12P48061 93 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 PAPD4Q6PIY7 484 aaKnown RBP17■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF679Q8IYX0 411 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 OR4D10Q8NGI6 311 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 WDR89Q96FK6 387 aaPredicted RBP17■□□□□ 0.31
RFTN1-201ENST00000334133 TRBV5-7A0A0A0MS05 114 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 SCRG1O75711 98 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 ALDOBP05062 364 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 POU3F4P49335 361 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF227Q86WZ6 799 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF768Q9H5H4 540 aaKnown RBP17■□□□□ 0.31
RFTN1-201ENST00000334133 METTL17Q9H7H0 456 aaPredicted RBP17■□□□□ 0.31
RFTN1-201ENST00000334133 CENPMQ9NSP4 180 aa17■□□□□ 0.31
RFTN1-201ENST00000334133 A0A1W2PQM1 296 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 DCDC2BA2VCK2 349 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 MS4A18H0YCH9 400 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 PEX14O75381 377 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 STARD6P59095 220 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 RASGEF1BQ0VAM2 473 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 FOXF1Q12946 379 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 MS4A18Q3C1V0 323 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 OR51A2Q8NGJ7 313 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 OR8S1Q8NH09 359 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 C5orf34Q96MH7 638 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 ZMAT3Q9HA38 289 aaKnown RBP16.99■□□□□ 0.31
RFTN1-201ENST00000334133 NOX3Q9HBY0 568 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 KLRF1Q9NZS2 232 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 COPZ2Q9P299 210 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 PCDHGA5Q9Y5G8 931 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 TRAV18A0A075B6X5 111 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 CALCBP10092 127 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 CCL7P80098 99 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 PUDPQ08623 228 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 CD276Q5ZPR3 534 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 OR10K2Q6IF99 312 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-201ENST00000334133 PLPP5Q8NEB5 264 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 OR52B4Q8NGK2 314 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 DVL3Q92997 716 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-201ENST00000334133 MCHR2Q969V1 340 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 TAS2R4Q9NYW5 299 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 STEAP1Q9UHE8 339 aa16.99■□□□□ 0.31
RFTN1-201ENST00000334133 PHF3Q92576 2039 aaKnown RBP16.99■□□□□ 0.31
RFTN1-201ENST00000334133 K7ESF4 209 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 RHBDD2Q6NTF9 364 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 DCXRQ7Z4W1 244 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 PRSS42Q7Z5A4 293 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 LUZP2Q86TE4 346 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 RAB40ALP0C0E4 278 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 PCGF3Q3KNV8 242 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 C2orf76Q3KRA6 126 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 TMEM205Q6UW68 189 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF248Q8NDW4 579 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 RAB40AQ8WXH6 277 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 CHRDQ9H2X0 955 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 CDV3Q9UKY7 258 aaKnown RBP16.98■□□□□ 0.31
RFTN1-201ENST00000334133 FTCDNL1E5RQL4 147 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 NPIPA5E9PKD4 350 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 SLC26A5P58743 744 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 UBE2MP61081 183 aaKnown RBP16.98■□□□□ 0.31
RFTN1-201ENST00000334133 TLE3Q04726 772 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 GLO1Q04760 184 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 SPOCK1Q08629 439 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 WDR45BQ5MNZ6 344 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 OR2T35Q8NGX2 323 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms