RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ULBP3Q9BZM4 244 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 TGIF2Q9GZN2 237 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 ZNF350Q9GZX5 532 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 FN3KRPQ9HA64 309 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.55■□□□□ 0.24
SOCS3-201ENST00000330871 SLC23A2Q9UGH3 650 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 VSIG4Q9Y279 399 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 ARID1AO14497 2285 aa16.55■□□□□ 0.24
SOCS3-201ENST00000330871 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CYB5R2Q6BCY4 276 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 RPL13AP3Q6NVV1 102 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 TMPRSS11FQ6ZWK6 438 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 ZNF765Q7L2R6 523 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 BPIFB2Q8N4F0 458 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 OR13C8Q8NGS7 320 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CA5BP1Q8WTZ4 195 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 LMF1Q96S06 567 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 NMNAT3Q96T66 252 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 LGR4Q9BXB1 951 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 IER3IP1Q9Y5U9 82 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SCN5AQ14524 2016 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 C7orf77A4D0Y5 90 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 MSGN1A6NI15 193 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 M0R036 132 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 TERTO14746 1132 aaKnown RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SPINT1O43278 529 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CXCL10P02778 98 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 VAMP1P23763 118 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 GLP1RP43220 463 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 TAS2R19P59542 299 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SKP1P63208 163 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SSX2Q16385 188 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 GXYLT1Q4G148 440 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 ZNF585AQ6P3V2 769 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 ZNF627Q7L945 461 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 TMCO2Q7Z6W1 182 aaPredicted RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SLC35F3Q8IY50 421 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 OR4S1Q8NGB4 309 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 OR5K2Q8NHB8 316 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SLC25A21Q9BQT8 299 aaPredicted RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 NRSN2Q9GZP1 204 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CST11Q9H112 138 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CHMP1AQ9HD42 196 aaPredicted RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 C9orf170A2RU37 121 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 IFITM10A6NMD0 228 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SLC31A2O15432 143 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CLEC3AO75596 197 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 LYPD3O95274 346 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 FGF19O95750 216 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 AIFM1O95831 613 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CD1AP06126 327 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 C8AP07357 584 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CCR2P41597 374 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 CASP6P55212 293 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SLC9A5Q14940 896 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 MRPL2Q5T653 305 aaKnown RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 AMZ2Q86W34 360 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 RNF113BQ8IZP6 322 aaKnown RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 ZSCAN4Q8NAM6 433 aaPredicted RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 OR5AK2Q8NH90 309 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 ROBO4Q8WZ75 1007 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 SLC6A7Q99884 636 aa16.54■□□□□ 0.24
SOCS3-201ENST00000330871 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
SOCS3-201ENST00000330871 TEX13DA0A0J9YY54 714 aaPredicted RBP16.53■□□□□ 0.24
SOCS3-201ENST00000330871 TMEM72A0PK05 275 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 MED6O75586 246 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 CSNK2A2P19784 350 aaPredicted RBP16.53■□□□□ 0.24
SOCS3-201ENST00000330871 CSRP1P21291 193 aaKnown RBP16.53■□□□□ 0.24
SOCS3-201ENST00000330871 HTRA3P83110 453 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 EXOSC6Q5RKV6 272 aaKnown RBP16.53■□□□□ 0.24
SOCS3-201ENST00000330871 BHLHE23Q8NDY6 225 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 GPX8Q8TED1 209 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 SEH1LQ96EE3 360 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 KIRREL1Q96J84 757 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 OPA3Q9H6K4 179 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 MTHFD2LQ9H903 347 aaPredicted RBP16.53■□□□□ 0.24
SOCS3-201ENST00000330871 PEX12O00623 359 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 LAMP2P13473 410 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 C6P13671 934 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 PSMB6P28072 239 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 GSK3AP49840 483 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 RAB5CP51148 216 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 METAP1P53582 386 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 IL13RA1P78552 427 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 DPTQ07507 201 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 C21orf62-AS1Q17RA5 79 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 ARHGAP11AQ6P4F7 1023 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 TMEM106AQ96A25 262 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 FBXO34Q9NWN3 711 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 FRRS1LQ9P0K9 344 aa16.53■□□□□ 0.24
SOCS3-201ENST00000330871 A0A1W2PPV9 198 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 C4orf47A7E2U8 309 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 ERI3O43414 337 aaKnown RBP16.52■□□□□ 0.24
SOCS3-201ENST00000330871 CD5P06127 495 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 ITGA5P08648 1049 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 CSNK1G2P78368 415 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 C2orf76Q3KRA6 126 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 TEX30Q5JUR7 227 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 SLC39A7Q92504 469 aa16.52■□□□□ 0.24
SOCS3-201ENST00000330871 PRDM13Q9H4Q3 707 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms