RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TMED4Q7Z7H5 227 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 FAM3DQ96BQ1 224 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 GGT3PA6NGU5 568 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 H0YIG0 161 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 XRCC3O43542 346 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF254O75437 659 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 NME1P15531 152 aaKnown RBP12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 CTLA4P16410 223 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 MNDAP41218 407 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 TDGQ13569 410 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 RAB11BQ15907 218 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 ANGPTL6Q8NI99 470 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 LAT2Q9GZY6 243 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 EXO5Q9H790 373 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 NPDC1Q9NQX5 325 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 PIPOXQ9P0Z9 390 aa12.68□□□□□ -0.38
ATP2C1-201ENST00000328560 TRAV36DV7A0A075B6V5 113 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 LINC00862A6NCI5 91 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 GOSR2O14653 212 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 CTAG2O75638 210 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 WNT11O96014 354 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 CD3DP04234 171 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 SRFP11831 508 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 CXCL2P19875 107 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 GABRA4P48169 554 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 EIF2B1Q14232 305 aaKnown RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 SLC17A1Q14916 467 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 GPR119Q8TDV5 335 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 MRI1Q9BV20 369 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ATXN7L1Q9ULK2 861 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 DHDHQ9UQ10 334 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 SPEF1Q9Y4P9 236 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 TMED7-TICAM2A0A0A6YYA0 188 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 FRG2CA6NGY1 282 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 DDAH2O95865 285 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 FREM3P0C091 2139 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 PGCP20142 388 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 PRSS3P35030 304 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 EGR3Q06889 387 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 MFGE8Q08431 387 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 C2orf68Q2NKX9 166 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 EMC4Q5J8M3 183 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 SLC18B1Q6NT16 456 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ALKAL2Q6UX46 152 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 C9orf40Q8IXQ3 194 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 EID2Q8N6I1 236 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 COQ8AQ8NI60 647 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 TMED7Q9Y3B3 224 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 A0A1W2PPL8 197 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 PRSS37A4D1T9 235 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF432O94892 652 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 TXNDC12O95881 172 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF35P13682 527 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 POU3F2P20265 443 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 EIF1AXP47813 144 aaKnown RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 SPOCK1Q08629 439 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 SMAD2Q15796 467 aaKnown RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 LANCL3Q6ZV70 420 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 TDHQ8IZJ6 230 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF721Q8TF20 911 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ADIPOR1Q96A54 375 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 OR8B4Q96RC9 309 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF587Q96SQ5 575 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 CMKLR1Q99788 373 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 CHST6Q9GZX3 395 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 ADAM19Q9H013 955 aa12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 COA3Q9Y2R0 106 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-201ENST00000328560 LOC100509620A0A075B734 347 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 RPS10-NUDT3A0A1W2PQS6 291 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 LILRA5A6NI73 299 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 H7C417 338 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 BGLAPP02818 100 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 HLA-DOBP13765 273 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 NFYAP23511 347 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 SLC6A8P48029 635 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 CSNK1EP49674 416 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 RPL27P61353 136 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 EBPQ15125 230 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 GLYATL3Q5SZD4 288 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF626Q68DY1 528 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 GSX2Q9BZM3 304 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 EXOSC3Q9NQT5 275 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 TAS2R4Q9NYW5 299 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 MTFP1Q9UDX5 166 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 PCNX3Q9H6A9 2034 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 ASCC3Q8N3C0 2202 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 METTL12A8MUP2 240 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 M0QYG6 137 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 IL11P20809 199 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 EFNA3P52797 238 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 INSM1Q01101 510 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms