RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 PROKR2Q8NFJ6 384 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 TRUB1Q8WWH5 349 aaKnown RBP12.36□□□□□ -0.43
CMTM1-201ENST00000328020 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 WACQ9BTA9 647 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 FN3KQ9H479 309 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 SRA1Q9HD15 236 aaKnown RBP12.36□□□□□ -0.43
CMTM1-201ENST00000328020 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 H2AFY2Q9P0M6 372 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-201ENST00000328020 NKX1-2Q9UD57 310 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-201ENST00000328020 FBXL3Q9UKT7 428 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 UTP20O75691 2785 aaKnown RBP12.36□□□□□ -0.43
CMTM1-201ENST00000328020 CENPEQ02224 2701 aa12.36□□□□□ -0.43
CMTM1-201ENST00000328020 A0A096LPE4 126 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 UBL3O95164 117 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 CLDN1O95832 211 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 HLA-DQA2P01906 255 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 EPXP11678 715 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 CTLA4P16410 223 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 IGFBP2P18065 325 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 MSR1P21757 451 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-201ENST00000328020 PCBD1P61457 104 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 SGCAQ16586 387 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 SLC36A2Q495M3 483 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 TTC23Q5W5X9 447 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 C12orf73Q69YU5 71 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-201ENST00000328020 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 ZBTB46Q86UZ6 589 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 CYB561A3Q8NBI2 242 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 OR8J1Q8NGP2 316 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-201ENST00000328020 HRASLS5Q96KN8 279 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 APOL4Q9BPW4 351 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 GRIP2Q9C0E4 1043 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-201ENST00000328020 KCNN3Q9UGI6 736 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 GMPPBQ9Y5P6 360 aa12.35□□□□□ -0.43
CMTM1-201ENST00000328020 SNTNA6NMZ2 147 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 C12orf71A8MTZ7 269 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 H0YJX3 145 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 PRODHO43272 600 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 MPZL2O60487 215 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 GOSR1O95249 250 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 SNAP29O95721 258 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 FMO3P31513 532 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 CCKARP32238 428 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 GGT2P36268 569 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 ARR3P36575 388 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 PTDSS1P48651 473 aaKnown RBP12.34□□□□□ -0.43
CMTM1-201ENST00000328020 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 ZNF362Q5T0B9 420 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-201ENST00000328020 FAM27BQ5VT28 67 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 TMEM53Q6P2H8 277 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
CMTM1-201ENST00000328020 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 OR10H5Q8NGA6 315 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 OR52N5Q8NH56 324 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 LINC01560Q8TB33 94 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 TMEM163Q8TC26 289 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 CCNB1IP1Q9NPC3 277 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 COA3Q9Y2R0 106 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-201ENST00000328020 POLR1DQ9Y2S0 133 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 UGT2A1Q9Y4X1 527 aa12.34□□□□□ -0.43
CMTM1-201ENST00000328020 IGLV1-36A0A0B4J1U3 117 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 LOC100130705A0A1B0GUX0 176 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 SLC16A6O15403 523 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 TLX2O43763 284 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-201ENST00000328020 TMCC2O75069 709 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 SEC14L2O76054 403 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 RAB36O95755 333 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 PTHP01270 115 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 HRGP04196 525 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 CST2P09228 141 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 CD79AP11912 226 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 ZNF823P16415 610 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 SPI1P17947 270 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 EPHA2P29317 976 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 CDAP32320 146 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 POLR2IP36954 125 aaKnown RBP12.33□□□□□ -0.44
CMTM1-201ENST00000328020 RPS7P62081 194 aaKnown RBP12.33□□□□□ -0.44
CMTM1-201ENST00000328020 LSM6P62312 80 aaKnown RBP12.33□□□□□ -0.44
CMTM1-201ENST00000328020 HSF2Q03933 536 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 KEAP1Q14145 624 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 TAB1Q15750 504 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 GSG1Q2KHT4 349 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
CMTM1-201ENST00000328020 LCN1P1Q5VSP4 162 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms