RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 NIPSNAP1Q9BPW8 284 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 FGF20Q9NP95 211 aaPredicted RBP4.56□□□□□ -1.68
LRIT3-201ENST00000327908 HRH3Q9Y5N1 445 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 KIAA1549Q9HCM3 1950 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 A0A1W2PPL8 197 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 ZNF878C9JN71 531 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 CDC42EP2O14613 210 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 HLA-DQA2P01906 255 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 KRT8P05787 483 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 CD1AP06126 327 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 SPI1P17947 270 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 CRYGSP22914 178 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 RAD52P43351 418 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 RNF144AP50876 292 aaPredicted RBP4.56□□□□□ -1.68
LRIT3-201ENST00000327908 GALK2Q01415 458 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 MALLQ13021 153 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 COL9A2Q14055 689 aaPredicted RBP4.56□□□□□ -1.68
LRIT3-201ENST00000327908 MAD2L1BPQ15013 274 aaPredicted RBP4.56□□□□□ -1.68
LRIT3-201ENST00000327908 PCK2Q16822 640 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 CEACAM16Q2WEN9 425 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 DRAM2Q6UX65 266 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 PAMR1Q6UXH9 720 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 IZUMO2Q6UXV1 221 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.56□□□□□ -1.68
LRIT3-201ENST00000327908 PHYHIPQ92561 330 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 TFAP2CQ92754 450 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 C14orf79Q96F83 325 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 TNFRSF10DQ9UBN6 386 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 TINAGQ9UJW2 476 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 PCDHGB5Q9Y5G0 923 aa4.56□□□□□ -1.68
LRIT3-201ENST00000327908 APC2O95996 2303 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 MED13Q9UHV7 2174 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 C5orf42Q9H799 3197 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 PHF3Q92576 2039 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 IGLV1-36A0A0B4J1U3 117 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 WIPF3A6NGB9 483 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 H3BUI4 141 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 XRCC2O43543 280 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 SLC16A7O60669 478 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 SNAP29O95721 258 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 HIST1H1CP16403 213 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 TTKP33981 857 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 DDOSTP39656 456 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 EVX1P49640 407 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 CAPZA1P52907 286 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ARF1P84077 181 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 TBRG1Q3YBR2 411 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 PRR30Q53SZ7 412 aaPredicted RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 MESTQ5EB52 335 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 C20orf204Q6ZNR8 217 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 USP51Q70EK9 711 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 FJX1Q86VR8 437 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 SLC22A24Q8N4F4 322 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 MARVELD2Q8N4S9 558 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 OR52H1Q8NGJ2 320 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 OR52N1Q8NH53 320 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ITLN2Q8WWU7 325 aaPredicted RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 PRR14Q9BWN1 585 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 MYOZ1Q9NP98 299 aaPredicted RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 EXOGQ9Y2C4 368 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 PTPRQQ9UMZ3 2332 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 DHRS7CA6NNS2 312 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ICMTO60725 284 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 FAM20BO75063 409 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 TNFAIP8O95379 198 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 F13BP05160 661 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 CD3EP07766 207 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 UGT2B10P36537 528 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 MTNR1AP48039 350 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 RIDAP52758 137 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 FAPQ12884 760 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 GABRA6Q16445 453 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 GSG1Q2KHT4 349 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 CCDC58Q4VC31 144 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 TSPO2Q5TGU0 170 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 AADACL4Q5VUY2 407 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ADAM5Q6NVV9 412 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ZNF704Q6ZNC4 412 aaPredicted RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 GALNT4Q8N4A0 578 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 KLHL36Q8N4N3 616 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ACBD7Q8N6N7 88 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 TCEANCQ8N8B7 351 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 SPERTQ8NA61 448 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 CPEB3Q8NE35 698 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 OR4Q3Q8NH05 313 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 OR4K13Q8NH42 304 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 FBLIM1Q8WUP2 373 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 WFDC6Q9BQY6 131 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 EGLN3Q9H6Z9 239 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 SLC7A10Q9NS82 523 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 LAMP5Q9UJQ1 280 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 CAB39Q9Y376 341 aaPredicted RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 ARHGAP21Q5T5U3 1957 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 GPRIN2O60269 458 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 MTRF1O75570 445 aaKnown RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 C1QL1O75973 258 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 SERPINA3P01011 423 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 CRYAAP02489 173 aa4.55□□□□□ -1.68
LRIT3-201ENST00000327908 TP53P04637 393 aaPredicted RBP4.55□□□□□ -1.68
LRIT3-201ENST00000327908 KIR2DL3P43628 341 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms