RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 LAP3P28838 519 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 OR3A2P47893 321 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 GTF2A1P52655 376 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 HSF2Q03933 536 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 TBCEQ15813 527 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 STK11Q15831 433 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 DOLPP1Q86YN1 238 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ERI1Q8IV48 349 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF100Q8IYN0 542 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 GCNT2Q8N0V5 402 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 FOXN4Q96NZ1 517 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ALKBH3Q96Q83 286 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 YIPF3Q9GZM5 350 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 A0A1W2PPL8 197 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 C12orf71A8MTZ7 269 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 ATXN7O15265 892 aaPredicted RBP9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 CLPTM1O96005 669 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 MYL12AP19105 171 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 EDNRAP25101 427 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF84P51523 738 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 NFATC3Q12968 1075 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 TSPO2Q5TGU0 170 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 KCTD8Q6ZWB6 473 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 ACBD7Q8N6N7 88 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 OR10H4Q8NGA5 316 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 OR6K3Q8NGY3 331 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 MNTQ99583 582 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 GPR35Q9HC97 309 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 VCX3AQ9NNX9 186 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC7A10Q9NS82 523 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 TAS2R16Q9NYV7 291 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 IGSF10Q6WRI0 2623 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 RPL36A-HNRNPH2H7BZ11 118 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 OR2T7P0C7T2 308 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 PCMT1P22061 227 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 TIMP3P35625 211 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 MAP2K4P45985 399 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 ENTPD1P49961 510 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 SIRPAP78324 504 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 EMX1Q04741 257 aaPredicted RBP9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 BLMHQ13867 455 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 KCNMB1Q16558 191 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 LINGO2Q7L985 606 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 CDC20BQ86Y33 519 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 OR6N2Q8NGY6 317 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 OR2T27Q8NH04 317 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 C12orf49Q9H741 205 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 WDR76Q9H967 626 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 CRLF2Q9HC73 371 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 KCNG2Q9UJ96 466 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 ZGRF1Q86YA3 2104 aa9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 RP1L1Q8IWN7 2480 aaPredicted RBP9.04□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF670-ZNF695F2Z2N8 137 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 KRT33AO76009 404 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 LIMS3P0CW19 117 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 LIMS4P0CW20 117 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ETV1P50549 477 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 PER3P56645 1201 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ADAM8P78325 824 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ROR2Q01974 943 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 MEP1BQ16820 701 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TEX30Q5JUR7 227 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TFAP2EQ6VUC0 442 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 RPRMLQ8N4K4 120 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 C11orf40Q8WZ69 217 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 FCGR1BQ92637 280 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF649Q9BS31 505 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TTYH2Q9BSA4 534 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ACOT13Q9NPJ3 140 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 POLE4Q9NR33 117 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ERVK13-1Q9NX77 482 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 MALT1Q9UDY8 824 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 CLEC2DQ9UHP7 191 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ERGIC3Q9Y282 383 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 PHF3Q92576 2039 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 A0A1W2PQL4 384 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TMEM129A0AVI4 362 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 DAPL1A0PJW8 107 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 MYL12BO14950 172 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TOXO94900 526 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 MPZL1O95297 269 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 PTHP01270 115 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 TMIGD3P0DMS9 266 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 GLI4P10075 376 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 JUNBP17275 347 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 CEACAM8P31997 349 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 CDAP32320 146 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 NR1H2P55055 460 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 MRPS34P82930 218 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 PCK2Q16822 640 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 CEACAM16Q2WEN9 425 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 XAF1Q6GPH4 301 aa9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 ABHD12BQ7Z5M8 362 aaPredicted RBP9.03□□□□□ -0.96
VIPAS39-201ENST00000327028 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms