RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 TPD52L3Q96J77 140 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ECSITQ9BQ95 431 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 MAN2C1Q9NTJ4 1040 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ARMCX1Q9P291 453 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 BAG5Q9UL15 447 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ZNF346Q9UL40 294 aaKnown RBP10.54□□□□□ -0.72
TPM3-204ENST00000323144 A4GNTQ9UNA3 340 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ZSCAN5BA6NJL1 495 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 RGS9O75916 674 aaPredicted RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 IGHMP01871 453 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 TFP02787 698 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 MSMBP08118 114 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 TROVE2P10155 538 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM3-204ENST00000323144 GAAP10253 952 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 IFI30P13284 250 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 ZNF250P15622 560 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 MAKP20794 623 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 YAP1P46937 504 aaKnown RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 MRPS34P82930 218 aaKnown RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 MMEL1Q495T6 779 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 NRN1LQ496H8 165 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 ALG10Q5BKT4 473 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 COQ5Q5HYK3 327 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 METTL21CQ5VZV1 264 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 ERICH5Q6P6B1 374 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 SEMA6DQ8NFY4 1073 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 OR2T12Q8NG77 320 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 OR1J1Q8NGS3 322 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 SYNPRQ8TBG9 265 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 SNX33Q8WV41 574 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 POLR2J2Q9GZM3 115 aaKnown RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 POLR2J3Q9H1A7 115 aaKnown RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 C1orf198Q9H425 327 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 METTL17Q9H7H0 456 aaPredicted RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 HINT3Q9NQE9 182 aaKnown RBP10.53□□□□□ -0.72
TPM3-204ENST00000323144 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 RHCGQ9UBD6 479 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 HIF3AQ9Y2N7 669 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 MED31Q9Y3C7 131 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
TPM3-204ENST00000323144 LOC100509620A0A075B734 347 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 IQCMA0A1B0GVH7 501 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 A0A1W2PPL8 197 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 NPIPB13A6NJU9 1138 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 CENPBD1B2RD01 187 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 B4DSR2 109 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 NPIPB4C9JG80 1138 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 TCF21O43680 179 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 ENTPD5O75356 428 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 IGF2P01344 180 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 CCNOP22674 350 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 APLNRP35414 380 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 ARFIP2P53365 341 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 LMO4P61968 165 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 MVKQ03426 396 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 FHL1Q13642 323 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 LAPTM4AQ15012 233 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 TSTQ16762 297 aaKnown RBP10.52□□□□□ -0.73
TPM3-204ENST00000323144 SPRNQ5BIV9 151 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 TMEM154Q6P9G4 183 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 SLC25A47Q6Q0C1 308 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 USP51Q70EK9 711 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 DPPA2Q7Z7J5 298 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 OFCC1Q8IZS5 231 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 RFLNBQ8N5W9 214 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 LRRC75AQ8NAA5 344 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 ZNF519Q8TB69 540 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 LIPHQ8WWY8 451 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 POM121L2Q96KW2 1035 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 LRRC37BQ96QE4 947 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 ZNF416Q9BWM5 594 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 WNT5BQ9H1J7 359 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 TXNIPQ9H3M7 391 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 POFUT1Q9H488 388 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 SMURF2Q9HAU4 748 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 CCNB1IP1Q9NPC3 277 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.73
TPM3-204ENST00000323144 CMTM6Q9NX76 183 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 CAPN7Q9Y6W3 813 aa10.52□□□□□ -0.73
TPM3-204ENST00000323144 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 IGHV1-69-2A0A0G2JMI3 117 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 SLC22A23A1A5C7 686 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 C5orf49A4QMS7 147 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 HAX1O00165 279 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 DEAF1O75398 565 aaPredicted RBP10.51□□□□□ -0.73
TPM3-204ENST00000323144 VENTXO95231 258 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 STOMP27105 288 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 LAP3P28838 519 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 KDELR2P33947 212 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 GPR4P46093 362 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 UCP2P55851 309 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 MRPS11P82912 194 aaKnown RBP10.51□□□□□ -0.73
TPM3-204ENST00000323144 PLP2Q04941 152 aa10.51□□□□□ -0.73
TPM3-204ENST00000323144 ENDOGQ14249 297 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms