RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RFX2P48378 723 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 EFNA3P52797 238 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 CDK5R2Q13319 367 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 TRAPPC6BQ86SZ2 158 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 OR14A16Q8NHC5 309 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 MRPL38Q96DV4 380 aaKnown RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 PDLIM5Q96HC4 596 aaKnown RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 ZNF300Q96RE9 604 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 ANKRD19PQ9H560 264 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 ADAMTS6Q9UKP5 1117 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 SERPINE3A8MV23 424 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 FABP7O15540 132 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 C8orf89P0DMQ9 161 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 CRISP2P16562 243 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 NKPD1Q17RQ9 610 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 Q6ZTK2 550 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 IL22RA1Q8N6P7 574 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 GPR87Q9BY21 358 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 FBXO4Q9UKT5 387 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 MOB4Q9Y3A3 225 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 PLSCR5A0PG75 271 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 CD1BP29016 333 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 LYSMD2Q8IV50 215 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 KLF15Q9UIH9 416 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 MOKQ9UQ07 419 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 A0A0J9YY10 115 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 A0A1B0GV90 55 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 RGS13O14921 159 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 HLXQ14774 488 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 FAHD2BQ6P2I3 314 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 OR2G3Q8NGZ4 309 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 FAHD2AQ96GK7 314 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 USB1Q9BQ65 265 aaKnown RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 HAO2Q9NYQ3 351 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 WASHC3Q9Y3C0 194 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 TAS2R60P59551 318 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 SLC14A1Q13336 389 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 C1GALT1Q9NS00 363 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 FBXO34Q9NWN3 711 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 WRAP73Q9P2S5 460 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-201ENST00000322507 LHX6Q9UPM6 363 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 COX6CP09669 75 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 SH3BP2P78314 561 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 HHEXQ03014 270 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 OR8G5Q8NG78 346 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 NARFLQ9H6Q4 476 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 FAM53CQ9NYF3 392 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 GPR83Q9NYM4 423 aa9.01□□□□□ -0.97
COL12A1-201ENST00000322507 PLCH1Q4KWH8 1693 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 CCL5P13501 91 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 DPPA4Q7L190 304 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 MAML2Q8IZL2 1156 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 OR6F1Q8NGZ6 308 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 PRO1933Q9H354 126 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 SIRT3Q9NTG7 399 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 NXT1Q9UKK6 140 aaKnown RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 TRAPPC2LQ9UL33 140 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 RNF24Q9Y225 148 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 CFAP20Q9Y6A4 193 aaKnown RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 MPPED1O15442 326 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 TMIGD3P0DMS9 266 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 MGAT3Q09327 533 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 PABPC1L2AQ5JQF8 200 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 DGAT2L6Q6ZPD8 337 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 TMEM183AQ8IXX5 376 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 BATF2Q8N1L9 274 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 SFXN2Q96NB2 322 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 IL37Q9NZH6 218 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 DOCK6Q96HP0 2047 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 YOD1Q5VVQ6 348 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 TXNRD3NBQ6F5E7 133 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 CISD2Q8N5K1 135 aaKnown RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 ZNF611Q8N823 705 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 IKZF4Q9H2S9 585 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 KCNK15Q9H427 330 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 A0A1W2PPH5 198 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 GBAP04062 536 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 ACKR3P25106 362 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 RABGGTBP53611 331 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 HENMT1Q5T8I9 393 aaKnown RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 LRP11Q86VZ4 500 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 ZFP90Q8TF47 636 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 DIO2Q92813 273 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 ZNF845Q96IR2 970 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 HDAC8Q9BY41 377 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 BOKQ9UMX3 212 aaPredicted RBP9□□□□□ -0.97
COL12A1-201ENST00000322507 USP54Q70EL1 1684 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 ABCA1O95477 2261 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 ZNF98A6NK75 572 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 CBR3O75828 277 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 CFHP08603 1231 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 TMEM225BP0DP42 221 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 CTSSP25774 331 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 MPGP29372 298 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 UBE2G1P62253 170 aa9□□□□□ -0.97
COL12A1-201ENST00000322507 PLGLAQ15195 96 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms