RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TGFAP01135 160 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 IFNA14P01570 189 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 IGHG1P01857 330 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
FOXR1-201ENST00000317011 TNFRSF1BP20333 461 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 COL8A2P25067 703 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 RPS23P62266 143 aaKnown RBP13.35□□□□□ -0.27
FOXR1-201ENST00000317011 SELENOWP63302 87 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 MRPS11P82912 194 aaKnown RBP13.35□□□□□ -0.27
FOXR1-201ENST00000317011 MS4A2Q01362 244 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 FLOT2Q14254 428 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 MELKQ14680 651 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 CARTPTQ16568 116 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 CYBRD1Q53TN4 286 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 FAM120AOSQ5T036 256 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 C10orf128Q5T292 105 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 DHFR2Q86XF0 187 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 PFN4Q8NHR9 129 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 TMEM255BQ8WV15 326 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 TMEM239Q8WW34 195 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 ASB10Q8WXI3 467 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 SGTBQ96EQ0 304 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 NSMCE2Q96MF7 247 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 SH3GL3Q99963 347 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 MUC13Q9H3R2 512 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 ACTR3BQ9P1U1 418 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 MYEF2Q9P2K5 600 aaKnown RBP13.35□□□□□ -0.27
FOXR1-201ENST00000317011 POMPQ9Y244 141 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 V9GYQ6 96 aa13.35□□□□□ -0.27
FOXR1-201ENST00000317011 IGLV3-9A0A075B6K5 115 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 SLC22A23A1A5C7 686 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 M0R233 179 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 PHF1O43189 567 aaPredicted RBP13.34□□□□□ -0.27
FOXR1-201ENST00000317011 SNAP29O95721 258 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 HPXP02790 462 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 F13BP05160 661 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 ZNF250P15622 560 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 ACADSP16219 412 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 IL2RGP31785 369 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 AQP2P41181 271 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 OR1E2P47887 323 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 CHN2P52757 468 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 NANOGNBQ7Z5D8 188 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
FOXR1-201ENST00000317011 OR4K5Q8NGD3 323 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 LRGUKQ96M69 825 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 RAB3IPQ96QF0 476 aaPredicted RBP13.34□□□□□ -0.27
FOXR1-201ENST00000317011 DYNLRB1Q9NP97 96 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 INIPQ9NRY2 104 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 A4GNTQ9UNA3 340 aa13.34□□□□□ -0.27
FOXR1-201ENST00000317011 A0A1W2PRG6 482 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 ACOT8O14734 319 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 FARS2O95363 451 aaKnown RBP13.33□□□□□ -0.28
FOXR1-201ENST00000317011 UMPSP11172 480 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 FUT4P22083 530 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 ALDH3B1P43353 468 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 ERFP50548 548 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 TMEM33P57088 247 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 TAS2R41P59536 307 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 MRPS34P82930 218 aaKnown RBP13.33□□□□□ -0.28
FOXR1-201ENST00000317011 GALK2Q01415 458 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 TRAP1Q12931 704 aaKnown RBP13.33□□□□□ -0.28
FOXR1-201ENST00000317011 FHL1Q13642 323 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 LCN8Q6JVE9 175 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 UGT2A3Q6UWM9 527 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 LRRC75AQ8NAA5 344 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 SLC30A7Q8NEW0 376 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 MOSPD2Q8NHP6 518 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 TPD52L3Q96J77 140 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 TPK1Q9H3S4 243 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 C1orf198Q9H425 327 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 GORASP2Q9H8Y8 452 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 SIAEQ9HAT2 523 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 SMURF2Q9HAU4 748 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 HIF3AQ9Y2N7 669 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 UGT2A1Q9Y4X1 527 aa13.33□□□□□ -0.28
FOXR1-201ENST00000317011 IGKV1D-43A0A0B4J1Z2 117 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 PTHP01270 115 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 SRD5A1P18405 259 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 DAP3P51398 398 aaKnown RBP13.32□□□□□ -0.28
FOXR1-201ENST00000317011 CDH15P55291 814 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 UCP2P55851 309 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 CLRN1P58418 232 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 TAF11Q15544 211 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 TRIP10Q15642 601 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 SLC36A2Q495M3 483 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 TMEM53Q6P2H8 277 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 SLC25A47Q6Q0C1 308 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 DEF8Q6ZN54 512 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 SLC16A14Q7RTX9 510 aa13.32□□□□□ -0.28
FOXR1-201ENST00000317011 HDDC2Q7Z4H3 204 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms