RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ITPRIPL2Q3MIP1 535 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 VN1R4Q7Z5H5 301 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 ANGPTL5Q86XS5 388 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 OR6N2Q8NGY6 317 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 TTTY10Q9BZA0 68 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 CST11Q9H112 138 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 UFSP2Q9NUQ7 469 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 DNAJB12Q9NXW2 375 aaKnown RBP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 FBLN5Q9UBX5 448 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 SCAMP1O15126 338 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 EIF3GO75821 320 aaKnown RBP eCLIP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 JTBO76095 146 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 PRF1P14222 555 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 SDHAP31040 664 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 NPBWR1P48145 328 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 RPS4XP62701 263 aaKnown RBP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 TRMT12Q53H54 448 aaKnown RBP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 ALG10Q5BKT4 473 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 NSUN5P2Q63ZY6 315 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 FAM109BQ6ICB4 259 aaPredicted RBP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 CDC20BQ86Y33 519 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 KDM8Q8N371 416 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 C10orf53Q8N6V4 93 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 DCUN1D4Q92564 292 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 MALSU1Q96EH3 234 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 SLC25A44Q96H78 314 aaPredicted RBP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 SMIM8Q96KF7 97 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 MAP3K3Q99759 626 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 CMKLR1Q99788 373 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 CCDC3Q9BQI4 270 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 PBDC1Q9BVG4 233 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 GPR174Q9BXC1 333 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 AICDAQ9GZX7 198 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 IL21RQ9HBE5 538 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 GSN-AS1Q9NRJ2 163 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 ANKRD10Q9NXR5 420 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 KCNE5Q9UJ90 142 aa4.34□□□□□ -1.72
PTPN13-201ENST00000316707 ABT1Q9ULW3 272 aaKnown RBP4.34□□□□□ -1.72
PTPN13-201ENST00000316707 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 XKRYO14609 159 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 STK17BO94768 372 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CSTAP01040 98 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CLUP10909 449 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RCC1P18754 421 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 HAAOP46952 286 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 LRRC37A5PQ49AS3 106 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FNDC3BQ53EP0 1204 aaKnown RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM128Q5BJH2 165 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 EEF1A1P5Q5VTE0 462 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DEGS2Q6QHC5 323 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 HIST2H3AQ71DI3 136 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ARL14Q8N4G2 192 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 EXD3Q8N9H8 876 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 LFNGQ8NES3 379 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OR52E1Q8NGJ3 308 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CYB5D2Q8WUJ1 264 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 AQP10Q96PS8 301 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OR5B2Q96R09 309 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SEBOXQ9HB31 216 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SLC23A2Q9UGH3 650 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DPP7Q9UHL4 492 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ADAM18Q9Y3Q7 739 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 BORCS7-ASMTA0A0B4J1R7 106 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 IGKV1-8A0A0C4DH67 115 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF705EA8MWA4 302 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SPINT1O43278 529 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OR2T1O43869 369 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OR6A2O95222 327 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 F10P00742 488 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RAB4BP61018 213 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ROM1Q03395 351 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ENPP2Q13822 863 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DHCR24Q15392 516 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 YOD1Q5VVQ6 348 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 WBP2NLQ6ICG8 309 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SLC18B1Q6NT16 456 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF679Q8IYX0 411 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 HOXB13Q92826 284 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SEC22AQ96IW7 307 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SLC41A2Q96JW4 573 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 MSRAQ9UJ68 235 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SCN10AQ9Y5Y9 1956 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PDCD11Q14690 1871 aaKnown RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1B0GVT2 93 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1W2PQ45 241 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1W2PQY0 241 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TSPAN15O95858 294 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RAB6AP20340 208 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CSRP1P21291 193 aaKnown RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PNLIPRP2P54317 469 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DEFA6Q01524 100 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 POM121L1PQ3SYA9 428 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PLPP4Q5VZY2 271 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 C7orf57Q8NEG2 295 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OR4A4PQ8NGN8 299 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RNF128Q8TEB7 428 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 C3orf49Q96BT1 292 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms