RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 GPR139Q6DWJ6 353 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 METAP1DQ6UB28 335 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 DHRS13Q6UX07 377 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 IDO2Q6ZQW0 420 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 HIST3H2AQ7L7L0 130 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 RABEPKQ7Z6M1 372 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ADGRG3Q86Y34 549 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 WDFY1Q8IWB7 410 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 NFAM1Q8NET5 270 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 TOR1AIP2Q8NFQ8 470 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 OR52N1Q8NH53 320 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 SNX33Q8WV41 574 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 HIST1H2ACQ93077 130 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF775Q96BV0 537 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 DEFB126Q9BYW3 111 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 METTL7AQ9H8H3 244 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF160Q9HCG1 818 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MRPL39Q9NYK5 338 aaKnown RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 SEMA5BQ9P283 1151 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 UBQLN2Q9UHD9 624 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MRTO4Q9UKD2 239 aaKnown RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF337Q9Y3M9 751 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 OTOGLQ3ZCN5 2332 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 AKAP13Q12802 2813 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF292O60281 2723 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 A0A1W2PNR3 127 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 C7orf66A4D0T2 115 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 PRR32B1ATL7 298 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SHOXO15266 292 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TRIM3O75382 744 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 KHDRBS3O75525 346 aaKnown RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ITGA10O75578 1167 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 KLF7O75840 302 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ICAM2P13598 275 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 CXCL2P19875 107 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TCN2P20062 427 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 RBMS1P29558 406 aaKnown RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 LCN1P31025 176 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 MTNR1BP49286 362 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 GPR85P60893 370 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SPEM2Q0P670 501 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 OR7A5Q15622 319 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 C2orf68Q2NKX9 166 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TUSC1Q2TAM9 212 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SLC25A30Q5SVS4 291 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF385CQ66K41 422 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TMEM81Q6P7N7 255 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SLC23A3Q6PIS1 610 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF782Q6ZMW2 699 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 GPAT4Q86UL3 456 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 CMTM4Q8IZR5 234 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 OR6V1Q8N148 313 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 STPG2Q8N412 459 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 PGLYRP3Q96LB9 341 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SFXN2Q96NB2 322 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SORCS2Q96PQ0 1159 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 DMRTA2Q96SC8 542 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 GINS4Q9BRT9 223 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 MRPS18AQ9NVS2 196 aaKnown RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 MED29Q9NX70 200 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 MUC6Q6W4X9 2439 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 CEP250Q9BV73 2442 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 FXYD6-FXYD2A0A087WZ82 144 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TMED7-TICAM2A0A0A6YYA0 188 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TMEM72A0PK05 275 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ALG1L2C9J202 215 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 FADS1O60427 444 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 MT-ND5P03915 603 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 UMODP07911 640 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 GP1BBP13224 206 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 SPI1P17947 270 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 AVPR2P30518 371 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 RAB14P61106 215 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 HSF2Q03933 536 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 BIKQ13323 160 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF468Q5VIY5 522 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 FCRLAQ7L513 359 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 MDGA2Q7Z553 956 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 RELL2Q8NC24 303 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 PLPP5Q8NEB5 264 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 OR11G2Q8NGC1 345 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF417Q8TAU3 575 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 FBXW5Q969U6 566 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 PPP1R14AQ96A00 147 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZC3H10Q96K80 434 aaKnown RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 UBL7Q96S82 380 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF587Q96SQ5 575 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF436Q9C0F3 470 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 FXYD6Q9H0Q3 95 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 RANBP3Q9H6Z4 567 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TAS2R5Q9NYW4 299 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 GPN3Q9UHW5 284 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 GTF2A1LQ9UNN4 478 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 EXOGQ9Y2C4 368 aaKnown RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 KLHDC2Q9Y2U9 406 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 TMED7Q9Y3B3 224 aa6.85□□□□□ -1.31
TRIM55-202ENST00000315962 RP1L1Q8IWN7 2480 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-202ENST00000315962 LINC00862A6NCI5 91 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms