RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 GNB1P62873 340 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 THEM4Q5T1C6 240 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 OR2V1Q8NHB1 315 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 NIPSNAP1Q9BPW8 284 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 CNOT11Q9UKZ1 510 aaKnown RBP12.31□□□□□ -0.44
RFFL-201ENST00000315249 A0A087WV62 115 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 M0R233 179 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 SPINT2O43291 252 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 FCMRO60667 390 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 ZNF92Q03936 586 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 DUSP8Q13202 625 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 ZNF181Q2M3W8 571 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 SYT14P1Q58G82 188 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 NUDT9Q9BW91 350 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 OLFM2O95897 454 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 HOXA1P49639 335 aaPredicted RBP12.31□□□□□ -0.44
RFFL-201ENST00000315249 AKR1C8PQ5T2L2 129 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 OTPQ5XKR4 325 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 OR10X1Q8NGY0 326 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 TEX51A0A1B0GUA7 166 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 IL13RA1P78552 427 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 TNK1Q13470 666 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 CGB2Q6NT52 195 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 ANKRD53Q8N9V6 530 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 NT5CQ8TCD5 201 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 ARL6Q9H0F7 186 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 GLCEO94923 617 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 MT-CO2P00403 227 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 ZNF83P51522 516 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 KCNJ8Q15842 424 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 USP51Q70EK9 711 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 OVCH1Q7RTY7 1134 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 PRSS41Q7RTY9 318 aa12.31□□□□□ -0.44
RFFL-201ENST00000315249 HOXB5P09067 269 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ADPRMQ3LIE5 342 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 GGHQ92820 318 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 MAELQ96JY0 434 aaKnown RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 SPNS1Q9H2V7 528 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 MOV10Q9HCE1 1003 aaKnown RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 MED17Q9NVC6 651 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ITGB1BP2Q9UKP3 347 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ALKBH1Q13686 389 aaKnown RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 ACKR1Q16570 336 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 C16orf47Q6ZP98 133 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 Q6ZTK2 550 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 KIAA1958Q8N8K9 716 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 TMEM102Q8N9M5 508 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 UBQLN3Q9H347 655 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 CNOT2Q9NZN8 540 aaKnown RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 P2RX6O15547 441 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 S100A2P29034 98 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 SPAG16Q8N0X2 631 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 FAM83FQ8NEG4 500 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 A0A087WZY1 265 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 B4GALT1P15291 398 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 POLR2IP36954 125 aaKnown RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 SNCAP37840 140 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 PHC1P78364 1004 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 FOXF1Q12946 379 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 MAVSQ7Z434 540 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 PLPP7Q8NBV4 271 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 DLEC1Q9Y238 1755 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ZNF705EA8MWA4 302 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 B8ZZF3 427 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 SPRY3O43610 288 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 SLC22A5O76082 557 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 GLRA1P23415 457 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 DNASE1P24855 282 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 SOX8P57073 446 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 NXNL2Q5VZ03 156 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 FNDC9Q8TBE3 224 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 RNF128Q8TEB7 428 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 FZR1Q9UM11 496 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 CSF1P09603 554 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 HTR2CP28335 458 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 MAP2K6P52564 334 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 HCCSP53701 268 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 CATR1Q13166 79 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 ANKRD37Q7Z713 158 aa12.3□□□□□ -0.44
RFFL-201ENST00000315249 CPNE4Q96A23 557 aaPredicted RBP12.3□□□□□ -0.44
RFFL-201ENST00000315249 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 CTSVO60911 334 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 IFNA1P01562 189 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 SLC14A1Q13336 389 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 OR4A16Q8NH70 328 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 SGK3Q96BR1 496 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ANKRD60Q9BZ19 345 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms