RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LCN6P62502 163 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 ERVK-25P63136 954 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 ENDOGQ14249 297 aaKnown RBP12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 ZBED5Q49AG3 693 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 CLEC2AQ6UVW9 174 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 SLC16A14Q7RTX9 510 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 ZER1Q7Z7L7 766 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 DEFB107AQ8IZN7 70 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 SLC30A7Q8NEW0 376 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 FAM168AQ92567 244 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 NSMAFQ92636 917 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 Q96M85 177 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 RHNO1Q9BSD3 238 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 NRIP3Q9NQ35 241 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 ADAM21Q9UKJ8 722 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 FBXL3Q9UKT7 428 aa12.55□□□□□ -0.4
PPP1CA-201ENST00000312989 HIVEP2P31629 2446 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 TCRBV5S2A0A599 114 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 SLC22A23A1A5C7 686 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 SH3PXD2BA1X283 911 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 CD5LO43866 347 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 FARS2O95363 451 aaKnown RBP12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 BMP4P12644 408 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 SLC25A16P16260 332 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 EVX1P49640 407 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 ZNF84P51523 738 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 ERVS71-1P61550 626 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 CD47Q08722 323 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 TMEM249Q2WGJ8 235 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 SLC36A2Q495M3 483 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 THEM4Q5T1C6 240 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 FAM205BPQ63HN1 556 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 DPPA2Q7Z7J5 298 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 POM121L2Q96KW2 1035 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 SLC7A8Q9UHI5 535 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 TMEM5Q9Y2B1 443 aa12.54□□□□□ -0.4
PPP1CA-201ENST00000312989 IGLV3-9A0A075B6K5 115 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 TXNDC12O95881 172 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 CSF3P09919 207 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 LAP3P28838 519 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 PCSK6P29122 969 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 WNT5AP41221 380 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 MAGEA2P43356 314 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 PSG4Q00888 419 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 SPATS1Q496A3 300 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 PABPC1L2AQ5JQF8 200 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 UGT2A3Q6UWM9 527 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 C16orf89Q6UX73 402 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 PTCHD4Q6ZW05 846 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 CYP4Z1Q86W10 505 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 RASD2Q96D21 266 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 RSRC1Q96IZ7 334 aaKnown RBP12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 NSMCE2Q96MF7 247 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 FZR1Q9UM11 496 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 CMAHPQ9Y471 501 aa12.53□□□□□ -0.4
PPP1CA-201ENST00000312989 IGHV4-61A0A0C4DH41 118 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 TEX13CA0A0J9YWL9 993 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 A6NIZ1 184 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 ICMTO60725 284 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 CST2P09228 141 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 FAM157BP0CG42 384 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 CTLA4P16410 223 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 NR4A2P43354 598 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 RAP1BP61224 184 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 RAP1AP62834 184 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 MS4A2Q01362 244 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 DBPQ10586 325 aaPredicted RBP12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 MAD2L1BPQ15013 274 aaPredicted RBP12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 RINLQ6ZS11 566 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 ZNF101Q8IZC7 436 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 SYT3Q9BQG1 590 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 IL1RAPQ9NPH3 570 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 VSX1Q9NZR4 365 aaPredicted RBP12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 FKBP7Q9Y680 259 aa12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
PPP1CA-201ENST00000312989 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 FBN1P35555 2871 aaKnown RBP12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 NDUFS8O00217 210 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 SYNGR3O43761 229 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 ENTPD5O75356 428 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 NDUFB2O95178 105 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 STAMBPO95630 424 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 CLPTM1O96005 669 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 ADRA2AP08913 450 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 IGHV4-31P0DP07 118 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 NR2C1P13056 603 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 ZNF250P15622 560 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 GIFP27352 417 aa12.51□□□□□ -0.41
PPP1CA-201ENST00000312989 ALDH3B1P43353 468 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms