RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ADAM8P78325 824 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 EBPQ15125 230 aaKnown RBP22.83■■□□□ 1.25
HOXB3-201ENST00000311626 EID2Q8N6I1 236 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 FAM3DQ96BQ1 224 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 OR8B4Q96RC9 309 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 MTFP1Q9UDX5 166 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 FBXL3Q9UKT7 428 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 TRAV36DV7A0A075B6V5 113 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 PLSCR5A0PG75 271 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 H2BFSP57053 126 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 COL13A1Q5TAT6 717 aaPredicted RBP22.83■■□□□ 1.25
HOXB3-201ENST00000311626 OR10K2Q6IF99 312 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 LANCL3Q6ZV70 420 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 GPR119Q8TDV5 335 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 DIABLOQ9NR28 239 aa22.83■■□□□ 1.25
HOXB3-201ENST00000311626 PRSS37A4D1T9 235 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 AANATQ16613 207 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 ARHGAP40Q5TG30 622 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 DCAF12L2Q5VW00 463 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 ANKRD16Q6P6B7 361 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 WDFY1Q8IWB7 410 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 OMA1Q96E52 524 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 CCNL2Q96S94 520 aaPredicted RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 RABL2AQ9UBK7 228 aaPredicted RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 RABL2BQ9UNT1 228 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 MAB21L2Q9Y586 359 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 ARPC5O15511 151 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 LMX1BO60663 402 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 GP1BBP13224 206 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 AP2S1P53680 142 aaPredicted RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 MRPS10P82664 201 aaKnown RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 RASGEF1BQ0VAM2 473 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 CLLU1Q5K131 121 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 KRT77Q7Z794 578 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 DUSP19Q8WTR2 217 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 THAP3Q8WTV1 239 aaPredicted RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 PELOQ9BRX2 385 aaKnown RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 GPN1Q9HCN4 374 aaPredicted RBP22.82■■□□□ 1.24
HOXB3-201ENST00000311626 TAS2R4Q9NYW5 299 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 EMC3Q9P0I2 261 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 AUP1Q9Y679 476 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 TMEM14AQ9Y6G1 99 aa22.82■■□□□ 1.24
HOXB3-201ENST00000311626 TMED7-TICAM2A0A0A6YYA0 188 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 OR2M5A3KFT3 312 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 ZNF35P13682 527 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 EIF2B1Q14232 305 aaKnown RBP22.81■■□□□ 1.24
HOXB3-201ENST00000311626 SLC36A1Q7Z2H8 476 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 OR51A2Q8NGJ7 313 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 OR1L3Q8NH93 324 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 PMEPA1Q969W9 287 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 TMED7Q9Y3B3 224 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 TMEM272A0A1B0GTI8 110 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 A0A1W2PPL8 197 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 DCDC2BA2VCK2 349 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 GOSR2O14653 212 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 HOXD11P31277 338 aaPredicted RBP22.81■■□□□ 1.24
HOXB3-201ENST00000311626 RAB14P61106 215 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 RPL27P61353 136 aaKnown RBP22.81■■□□□ 1.24
HOXB3-201ENST00000311626 RAB11BQ15907 218 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 MAMDC2Q7Z304 686 aaPredicted RBP22.81■■□□□ 1.24
HOXB3-201ENST00000311626 GKN2Q86XP6 184 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 MUC20Q8N307 709 aaPredicted RBP22.81■■□□□ 1.24
HOXB3-201ENST00000311626 SPICQ8N5J4 248 aa22.81■■□□□ 1.24
HOXB3-201ENST00000311626 COA3Q9Y2R0 106 aaPredicted RBP22.81■■□□□ 1.24
HOXB3-201ENST00000311626 IGHV1OR15-9A0A0B4J2B8 117 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 NFYAP23511 347 aaPredicted RBP22.8■■□□□ 1.24
HOXB3-201ENST00000311626 ABCD3P28288 659 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 CD38P28907 300 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 NUDT1P36639 197 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 ZNF627Q7L945 461 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 ADGRG3Q86Y34 549 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 SMRP1Q8NCR6 262 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 ZNF587Q96SQ5 575 aaPredicted RBP22.8■■□□□ 1.24
HOXB3-201ENST00000311626 MRI1Q9BV20 369 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 TMEM138Q9NPI0 162 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 SPAG17Q6Q759 2223 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 FXYD6-FXYD2A0A087WZ82 144 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 IGKV3D-11A0A0A0MRZ8 115 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 LOC101059948A0A1B0GTJ6 334 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 IGF2P01344 180 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 NME1P15531 152 aaKnown RBP22.8■■□□□ 1.24
HOXB3-201ENST00000311626 ARL4DP49703 201 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 FMODQ06828 376 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 LINC00346Q8IVM7 164 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 TSTD1Q8NFU3 115 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 FXYD6Q9H0Q3 95 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 MKL2Q9ULH7 1088 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 KIF26BQ2KJY2 2108 aa22.8■■□□□ 1.24
HOXB3-201ENST00000311626 RHPN2P1A8MT19 583 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 SHOXO15266 292 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 TSPAN2O60636 221 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 IGLV3-19P01714 112 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 GIPP09681 153 aaPredicted RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 ZNF679Q8IYX0 411 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 ABHD6Q9BV23 337 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 GSX2Q9BZM3 304 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 WWTR1Q9GZV5 400 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 MRTO4Q9UKD2 239 aaKnown RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 FITM1A5D6W6 292 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 MCRIP1C9JLW8 97 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms