RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CD200R1Q8TD46 325 aa12.4□□□□□ -0.42
TRIM56-201ENST00000306085 RANBP9Q96S59 729 aa12.4□□□□□ -0.42
TRIM56-201ENST00000306085 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
TRIM56-201ENST00000306085 ANKRD26Q9UPS8 1709 aa12.4□□□□□ -0.42
TRIM56-201ENST00000306085 ABCC6O95255 1503 aa12.4□□□□□ -0.42
TRIM56-201ENST00000306085 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.42
TRIM56-201ENST00000306085 PPLO60437 1756 aa12.4□□□□□ -0.43
TRIM56-201ENST00000306085 A0A1B0GTQ1 180 aa12.4□□□□□ -0.43
TRIM56-201ENST00000306085 ZCWPW2A0A1B0GU75 182 aa12.4□□□□□ -0.43
TRIM56-201ENST00000306085 AKR1C3P42330 323 aa12.4□□□□□ -0.43
TRIM56-201ENST00000306085 SLC22A24Q8N4F4 322 aa12.4□□□□□ -0.43
TRIM56-201ENST00000306085 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.43
TRIM56-201ENST00000306085 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 GPM6AP51674 278 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ERVPABLB-1P60509 514 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SLC6A18Q96N87 628 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 CNMDO75829 334 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SEMA4FO95754 770 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ADGRE4PQ86SQ3 457 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 C12orf49Q9H741 205 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 BTNL2Q9UIR0 455 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 CBLCQ9ULV8 474 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF595Q8IYB9 648 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SNX11Q9Y5W9 270 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 KIAA2026Q5HYC2 2103 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 EVX2Q03828 476 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 LETMD1Q6P1Q0 360 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 TMEM184AQ6ZMB5 413 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 TSEN54Q7Z6J9 526 aaKnown RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 S1PR4O95977 384 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 PSAPL1Q6NUJ1 521 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 LCTLQ6UWM7 567 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SCGB1D4Q6XE38 83 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SUSD2Q9UGT4 822 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 NUDT3O95989 172 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SULT1A1P50225 295 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 FDX2Q6P4F2 183 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 OR13C8Q8NGS7 320 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 PCED1AQ9H1Q7 454 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 RBFOX1Q9NWB1 397 aaKnown RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 BET1LQ9NYM9 111 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 NPTNQ9Y639 398 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 FOXE1O00358 373 aaPredicted RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 LALBAP00709 142 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 WNT7BP56706 349 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 FCN2Q15485 313 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 HSBP1O75506 76 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 RNF212Q495C1 297 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 GGNBP1Q5YKI7 109 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF300Q96RE9 604 aaPredicted RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 CNOT2Q9NZN8 540 aaKnown RBP12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ADGRB1O14514 1584 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 NSG1A0A0A6YYJ2 146 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 GPR37O15354 613 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 CST6Q15828 149 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 VRK2Q86Y07 508 aa12.39□□□□□ -0.43
TRIM56-201ENST00000306085 ITGB7P26010 798 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 DCTP40126 519 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 GATMP50440 423 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 TBC1D28Q2M2D7 210 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 NCR3LG1Q68D85 454 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 GABRR3A8MPY1 467 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 P2RY10O00398 339 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 ONECUT2O95948 504 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 NKX2-1P43699 371 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 NKX2-4Q9H2Z4 354 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 TRBV4-1A0A0J9YWV2 114 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 RNF224P0DH78 156 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 FGF7P21781 194 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 FDXRP22570 491 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 PELI2Q9HAT8 420 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 TRAPPC4Q9Y296 219 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 TACR1P25103 407 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 GSX1Q9H4S2 264 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 ELAVL4P26378 380 aaKnown RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 ARSDP51689 593 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 ERHP84090 104 aaKnown RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 LINC00346Q8IVM7 164 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 CHRDL1Q9BU40 450 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 PLA2G12AQ9BZM1 189 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 DNAJC15Q9Y5T4 150 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 HIST1H3AP68431 136 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms