RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF83P51522 516 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 PLGLAQ15195 96 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ESCO2Q56NI9 601 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 FNDC9Q8TBE3 224 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ST7LQ8TDW4 575 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 FCAMRQ8WWV6 532 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 H1FXQ92522 213 aaKnown RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 CPNE5Q9HCH3 593 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 EXOSC3Q9NQT5 275 aaKnown RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 GLTPQ9NZD2 209 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 EXTL2Q9UBQ6 330 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 MEMO1Q9Y316 297 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 NUP214P35658 2090 aaPredicted RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 VWA8A3KMH1 1905 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 FXYD1O00168 92 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 UBL3O95164 117 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 YES1P07947 543 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 HTR1FP30939 366 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 PLA2G5P39877 138 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 CX3CR1P49238 355 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SNRPD2P62316 118 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 GPR176Q14439 515 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF404Q494X3 552 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 RGS7BPQ6MZT1 257 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 TBC1D15Q8TC07 691 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 PSMF1Q92530 271 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 METTL9Q9H1A3 318 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SLC25A18Q9H1K4 315 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SLC6A13Q9NSD5 602 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 AASSQ9UDR5 926 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 CMAHPQ9Y471 501 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 RP1P56715 2156 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 PDCD11Q14690 1871 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 A0A0B4J2E0 115 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 A0A1B0GX12 115 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SLC22A23A1A5C7 686 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 M0R135 149 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 UBCP0CG48 685 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 EDN3P14138 238 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SERPINA2P20848 420 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 GSG1Q2KHT4 349 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 C1orf87Q8N0U7 546 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 C17orf47Q8NEP4 570 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF799Q96GE5 643 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF281Q9Y2X9 895 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 FITM1A5D6W6 292 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 P2RY10O00398 339 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 EFSO43281 561 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 DENRO43583 198 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 POLR2IP36954 125 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 PMP22Q01453 160 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF74Q16587 644 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF691Q5VV52 312 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF574Q6ZN55 896 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 HAVCR1Q96D42 359 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SPSB2Q99619 263 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ARHGDIGQ99819 225 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ENAMQ9NRM1 1142 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 MAN2C1Q9NTJ4 1040 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 AK6Q9Y3D8 172 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SELENOFO60613 162 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 OR7C1O76099 320 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 RLN2P04090 185 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 FAM87AP0C7U9 286 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 RAB1AP62820 205 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ARF1P84077 181 aaKnown RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 TUBA3EQ6PEY2 450 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 CORO6Q6QEF8 472 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 TMED4Q7Z7H5 227 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 NOXO1Q8NFA2 376 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 ZG16BQ96DA0 208 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 SLAMF6Q96DU3 332 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 TXNDC15Q96J42 360 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 HRASLS5Q96KN8 279 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 TUBA1CQ9BQE3 449 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 RTL8AQ9BWD3 113 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 CMC2Q9NRP2 79 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 FOXD3Q9UJU5 478 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-202ENST00000306042 OR52A1Q9UKL2 312 aa8.35□□□□□ -1.07
PTPRE-202ENST00000306042 DPPA5A6NC42 116 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 B4DXG7 233 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 DLGAP1O14490 977 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CDK2AP1O14519 115 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 PRKYO43930 277 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 MRPS14O60783 128 aaKnown RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 LYZL6O75951 148 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CDK1P06493 297 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 GTF2F2P13984 249 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 ARSBP15848 533 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 C21orf58P58505 322 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 NHLH1Q02575 133 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 PXKQ7Z7A4 578 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 DPPA2Q7Z7J5 298 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 ACOT12Q8WYK0 555 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 TAAR8Q969N4 342 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 RNF170Q96K19 258 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 ATF6BQ99941 703 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 METTL8Q9H825 291 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms