RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CR1LQ2VPA4 569 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 THEM4Q5T1C6 240 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 LRP11Q86VZ4 500 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 PHC2Q8IXK0 858 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 RNF113BQ8IZP6 322 aaKnown RBP14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 LRRC18Q8N456 261 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 MOSPD2Q8NHP6 518 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 GEMIN6Q8WXD5 167 aaKnown RBP14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 RCN3Q96D15 328 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 RBP7Q96R05 134 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 HOPXQ9BPY8 73 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 REPIN1Q9BWE0 567 aaKnown RBP14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 NKIRAS2Q9NYR9 191 aa14.29□□□□□ -0.12
TRAPPC1-201ENST00000303731 A6NIZ1 184 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 B4DSR2 109 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 CCDC22O60826 627 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 TFP02787 698 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 HPXP02790 462 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 SAGP10523 405 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 IFI30P13284 250 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 SLC9A3P48764 834 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 SEC24CP53992 1094 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 DVL1P1P54792 670 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 RAP1BP61224 184 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 RPL27P61353 136 aaKnown RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 RAP1AP62834 184 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 TEKQ02763 1124 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 MAD2L1BPQ15013 274 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 TRAM2Q15035 370 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 TMEM154Q6P9G4 183 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 NMD3Q96D46 503 aaKnown RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 SOX7Q9BT81 388 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 FNDC11Q9BVV2 318 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 HINT3Q9NQE9 182 aaKnown RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 TAAR3PQ9P1P4 343 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 MYEF2Q9P2K5 600 aaKnown RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 TMEFF2Q9UIK5 374 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 FZR1Q9UM11 496 aa14.28□□□□□ -0.12
TRAPPC1-201ENST00000303731 C17orf100A8MU93 164 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 LYNX1G3V0Z9 82 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 SLC2A10O95528 541 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 LYNX1P0DP58 116 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 NAT2P11245 290 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 TCN1P20061 433 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 DRD4P21917 467 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 STOMP27105 288 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 PCBD1P61457 104 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 GUCY1A3Q02108 690 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 LAPTM4AQ15012 233 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 TRIP10Q15642 601 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 PABPC1L2AQ5JQF8 200 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 FAM209AQ5JX71 171 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 FAM27BQ5VT28 67 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 ALDH16A1Q8IZ83 802 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 PAQR4Q8N4S7 273 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 FAM156AQ8NDB6 213 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 HDAC2Q92769 488 aaKnown RBP14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 NABP1Q96AH0 204 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 WACQ9BTA9 647 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 NDEL1Q9GZM8 345 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 EFCAB1Q9HAE3 211 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 MED4Q9NPJ6 270 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 CMTM6Q9NX76 183 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 ARMCX1Q9P291 453 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 EIF3KQ9UBQ5 218 aaKnown RBP14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 UGT2A1Q9Y4X1 527 aa14.27□□□□□ -0.13
TRAPPC1-201ENST00000303731 H3BSA7 217 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 CXCR6O00574 342 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 GSTA4O15217 222 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 IGHV3-13P01766 116 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 CST2P09228 141 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 CCL2P13500 99 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 IL2RGP31785 369 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 CTXN1P60606 82 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 LIPEQ05469 1076 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 PRKCDQ05655 676 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 SF3A3Q12874 501 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 IFI44LQ53G44 452 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 LIPNQ5VXI9 398 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 SLC25A47Q6Q0C1 308 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 HACD2Q6Y1H2 254 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 CBLL1Q75N03 491 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 OAFQ86UD1 273 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 GLCCI1Q86VQ1 547 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 CYP4Z1Q86W10 505 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 NRMQ8IXM6 262 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 SLC15A3Q8IY34 581 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 POU5F2Q8N7G0 328 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 ACOT11Q8WXI4 607 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 ANKRD19PQ9H560 264 aa14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 ZNF275Q9NSD4 429 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC1-201ENST00000303731 EFCAB9A8MZ26 197 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 AHCYL1O43865 530 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 PIP5K1CO60331 668 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 ZNF682O95780 498 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 CLPTM1O96005 669 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 COX4I1P13073 169 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 ZNF32P17041 273 aa14.25□□□□□ -0.13
TRAPPC1-201ENST00000303731 COL8A2P25067 703 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms