RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ZNF99A8MXY4 864 aaPredicted RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 J3QRE1 110 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 KHDRBS3O75525 346 aaKnown RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 SEC14L2O76054 403 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 GLCEO94923 617 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 RENP00797 406 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 MPGP29372 298 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 GSTT1P30711 240 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 CCKARP32238 428 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 SLC15A1P46059 708 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 ARF1P84077 181 aaKnown RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 APOFQ13790 326 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 ENDOGQ14249 297 aaKnown RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 GABRA6Q16445 453 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 MEP1BQ16820 701 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 PCK2Q16822 640 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 C9orf135Q5VTT2 229 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 MEPCEQ7L2J0 689 aaKnown RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 THAP5Q7Z6K1 395 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 CXorf67Q86X51 503 aaPredicted RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 TIGD4Q8IY51 512 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 C8orf59Q8N0T1 100 aaPredicted RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 GPR137CQ8N3F9 429 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 FNDC8Q8TC99 324 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 BCL2L2Q92843 193 aaPredicted RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 APOL4Q9BPW4 351 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 RBM24Q9BX46 236 aaKnown RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 OR51V1Q9H2C8 321 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 WDR76Q9H967 626 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 MRPS18AQ9NVS2 196 aaKnown RBP8.32□□□□□ -1.08
RFX3-201ENST00000302303 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
RFX3-201ENST00000302303 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 USP9XQ93008 2570 aaPredicted RBP8.31□□□□□ -1.08
RFX3-201ENST00000302303 NKX2-6A6NCS4 301 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 DVL2O14641 736 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 PRODHO43272 600 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 LYZL6O75951 148 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 PSMB1P20618 241 aaKnown RBP8.31□□□□□ -1.08
RFX3-201ENST00000302303 AGAP20933 346 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
RFX3-201ENST00000302303 LAP3P28838 519 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 CRABP1P29762 137 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 HTR1FP30939 366 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 NUDT6P53370 316 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 MRPS34P82930 218 aaKnown RBP8.31□□□□□ -1.08
RFX3-201ENST00000302303 IL5RAQ01344 420 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 TEKQ02763 1124 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 HSF2Q03933 536 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 GGTLC2Q14390 218 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 C6orf141Q5SZD1 244 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 SFRP5Q5T4F7 317 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 SEZ6L2Q6UXD5 910 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 BEND4Q6ZU67 534 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 GLB1L2Q8IW92 636 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 SKA3Q8IX90 412 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 UBE2J2Q8N2K1 259 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 WDR31Q8NA23 367 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 OR1K1Q8NGR3 316 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 OR2T4Q8NH00 348 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 SMAP2Q8WU79 429 aaPredicted RBP8.31□□□□□ -1.08
RFX3-201ENST00000302303 C11orf40Q8WZ69 217 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 SGCDQ92629 289 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 ZMYND19Q96E35 227 aaPredicted RBP8.31□□□□□ -1.08
RFX3-201ENST00000302303 FBXO17Q96EF6 278 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 ZNF75AQ96N20 296 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 FOXB1Q99853 325 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 ZNF649Q9BS31 505 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 AMBNQ9NP70 447 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 POLE4Q9NR33 117 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 IMPAD1Q9NX62 359 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 GALNT8Q9NY28 637 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 B3GNT2Q9NY97 397 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 TAS2R16Q9NYV7 291 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 UPB1Q9UBR1 384 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 MOKQ9UQ07 419 aa8.31□□□□□ -1.08
RFX3-201ENST00000302303 DIDO1Q9BTC0 2240 aaKnown RBP8.3□□□□□ -1.08
RFX3-201ENST00000302303 TVP23AA6NH52 213 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 EEF1E1-BLOC1S5C9J1V9 151 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 ZNF587BE7ETH6 402 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 EEF1E1O43324 174 aaKnown RBP8.3□□□□□ -1.08
RFX3-201ENST00000302303 MPZL2O60487 215 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 MMP7P09237 267 aaPredicted RBP8.3□□□□□ -1.08
RFX3-201ENST00000302303 FMO3P31513 532 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 RPS27P42677 84 aaKnown RBP8.3□□□□□ -1.08
RFX3-201ENST00000302303 HCCSP53701 268 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 HIST1H3AP68431 136 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 MVKQ03426 396 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 P2RY6Q15077 328 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 SLC25A35Q3KQZ1 300 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 SLC35D3Q5M8T2 416 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 HIST2H3PS2Q5TEC6 136 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 FAM27BQ5VT28 67 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 MEDAGQ5VYS4 303 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 XKRXQ6PP77 449 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 HIST2H3AQ71DI3 136 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 SLC22A24Q8N4F4 322 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 SETD9Q8NE22 299 aa8.3□□□□□ -1.08
RFX3-201ENST00000302303 ASB5Q8WWX0 329 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms