RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ERV3-1Q14264 604 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 TGIF1Q15583 401 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 DEFB110Q30KQ9 67 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ULK3Q6PHR2 472 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 PARGQ86W56 976 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 CLEC1AQ8NC01 280 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 SPACA7Q96KW9 195 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 UTP23Q9BRU9 249 aaKnown RBP13.3□□□□□ -0.28
COL6A2-201ENST00000300527 SFXN1Q9H9B4 322 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 LRIT1Q9P2V4 623 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 UPK3AO75631 287 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ACAA2P42765 397 aaKnown RBP13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ACTBP60709 375 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ACTG1P63261 375 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 PDGFRLQ15198 375 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 GVQW1Q8N7I0 195 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 STOML3Q8TAV4 291 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ELOVL3Q9HB03 270 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
COL6A2-201ENST00000300527 OR2F2O95006 317 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 OR6A2O95222 327 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 FABP1P07148 127 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 SPARCP09486 303 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 RORAP35398 523 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 OR2F1Q13607 317 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ZNHIT3Q15649 155 aaPredicted RBP13.3□□□□□ -0.28
COL6A2-201ENST00000300527 VITQ6UXI7 678 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 DPY19L2P2Q6ZN68 376 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 TMPPEQ6ZT21 453 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF584Q8IVC4 421 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 TMIEQ8NEW7 156 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 CCL4L1Q8NHW4 92 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ROBO4Q8WZ75 1007 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 MOGAT1Q96PD6 335 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 CST11Q9H112 138 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 TMED7Q9Y3B3 224 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 CSAG2Q9Y5P2 127 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 SPACA6W5XKT8 324 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ADH1CP00326 375 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 IGKV1D-16P01601 117 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 PPT1P50897 306 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 MPPED2Q15777 294 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 MOGAT2Q3SYC2 334 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 ALG10Q5BKT4 473 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 EXOSC6Q5RKV6 272 aaKnown RBP13.29□□□□□ -0.28
COL6A2-201ENST00000300527 FAM122BQ7Z309 247 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 LINC00469Q8N7U9 141 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 C14orf79Q96F83 325 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 ZFP57Q9NU63 452 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 GRHPRQ9UBQ7 328 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 HPGDP15428 266 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF528Q3MIS6 628 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
COL6A2-201ENST00000300527 WDR38Q5JTN6 314 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 FBXO42Q6P3S6 717 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 MDGA2Q7Z553 956 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 OR14C36Q8NHC7 312 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 SEH1LQ96EE3 360 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 RAB11FIP5Q9BXF6 653 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 DUSP22Q9NRW4 184 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 OR4C45A6NMZ5 311 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 SNAPINO95295 136 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 ACAA1P09110 424 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-201ENST00000300527 PI3P19957 117 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 PEA15Q15121 130 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 MEP1BQ16820 701 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 LINC01590Q5TEZ4 76 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF585AQ6P3V2 769 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 SLC16A9Q7RTY1 509 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-201ENST00000300527 C12orf76Q8N812 135 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-201ENST00000300527 GLYATL2Q8WU03 294 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 SLC25A36Q96CQ1 311 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 FOXRED1Q96CU9 486 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-201ENST00000300527 FAM117AQ9C073 453 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 TAS2R4Q9NYW5 299 aa13.29□□□□□ -0.28
COL6A2-201ENST00000300527 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 LOC100289279A0A1B0GTE1 492 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 RIPPLY1Q0D2K3 151 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 FCRL6Q6DN72 434 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 OR4C3Q8NH37 302 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 NUDCD2Q8WVJ2 157 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 RERGQ96A58 199 aaPredicted RBP13.28□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D29Q9UFV1 150 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 VSIG4Q9Y279 399 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 DTX4Q9Y2E6 619 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 RPH3AQ9Y2J0 694 aaPredicted RBP13.28□□□□□ -0.28
COL6A2-201ENST00000300527 SOX1O00570 391 aaPredicted RBP13.28□□□□□ -0.28
COL6A2-201ENST00000300527 RDH16O75452 317 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 NME2P22392 152 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 ITGB8P26012 769 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 KRBOX4Q5JUW0 171 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 OR51A2Q8NGJ7 313 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 SERINC2Q96SA4 455 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 GSKIPQ9P0R6 139 aa13.28□□□□□ -0.28
COL6A2-201ENST00000300527 ASCC3Q8N3C0 2202 aaKnown RBP13.28□□□□□ -0.28
COL6A2-201ENST00000300527 SULT2B1O00204 365 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms