RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RCE1Q9Y256 329 aa5.18□□□□□ -1.58
SSX3-201ENST00000298396 RRP15Q9Y3B9 282 aaKnown RBP5.18□□□□□ -1.58
SSX3-201ENST00000298396 UGT2A1Q9Y4X1 527 aa5.18□□□□□ -1.58
SSX3-201ENST00000298396 IER3IP1Q9Y5U9 82 aa5.18□□□□□ -1.58
SSX3-201ENST00000298396 ANKRD17O75179 2603 aaKnown RBP5.18□□□□□ -1.58
SSX3-201ENST00000298396 VPS13CQ709C8 3753 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SETXQ7Z333 2677 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 A0A1W2PRG6 482 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SLC22A23A1A5C7 686 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 A1L4Q6 167 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 OR6C68A6NDL8 312 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ZAR1LA6NP61 321 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 NOTOA8MTQ0 251 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 G3V2T6 193 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 RPL36A-HNRNPH2H7BZ11 118 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 DVL2O14641 736 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ARPC3O15145 178 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SLC43A1O75387 559 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 MRPL33O75394 65 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 LYZL6O75951 148 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SEC14L2O76054 403 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 OR6A2O95222 327 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 BCL10O95999 233 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 THBDP07204 575 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 PSKH1P11801 424 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 OSMP13725 252 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 APEHP13798 732 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 ACADSP16219 412 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 HIST1H1CP16403 213 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 CTLA4P16410 223 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SDHAP31040 664 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 HOXC12P31275 282 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ACVR1BP36896 505 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 IFNGR2P38484 337 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 CD79BP40259 229 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 CDK5Q00535 292 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 FAPQ12884 760 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 COX10Q12887 443 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 KRR1Q13601 381 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 C1DQ13901 141 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 DAG1Q14118 895 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ETFDHQ16134 617 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 PGGHGQ32M88 737 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SLC35F1Q5T1Q4 408 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 C10orf128Q5T292 105 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 C9orf135Q5VTT2 229 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 FBXW9Q5XUX1 488 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 HIST2H2BCQ6DN03 193 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SLC25A47Q6Q0C1 308 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 Q6ZT83 130 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ZNF100Q8IYN0 542 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 PARP8Q8N3A8 854 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 LNX2Q8N448 690 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ARIH2OSQ8N7S6 290 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 WDR31Q8NA23 367 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ATG16L2Q8NAA4 619 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SYT14Q8NB59 555 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 NPEPL1Q8NDH3 523 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 MAGEE2Q8TD90 523 aaPredicted RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 STMN2Q93045 179 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 RNASE6Q93091 150 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 NABP1Q96AH0 204 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 APH1AQ96BI3 265 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SLC25A44Q96H78 314 aaPredicted RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 LRR1Q96L50 414 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ZNF570Q96NI8 536 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 TSSK2Q96PF2 358 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ERMAPQ96PL5 475 aaPredicted RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 RBM24Q9BX46 236 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 TSSK6Q9BXA6 273 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 HCAR1Q9BXC0 346 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 GABARAPL3Q9BY60 117 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 LINC00470Q9BZP3 86 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 NMNAT2Q9BZQ4 307 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 FN3KQ9H479 309 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 RNPEPL1Q9HAU8 725 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 SLC25A19Q9HC21 320 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 KRCC1Q9NPI7 259 aaPredicted RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 PAPOLBQ9NRJ5 636 aaKnown RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 KRT84Q9NSB2 600 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 TBC1D23Q9NUY8 699 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 GLTPQ9NZD2 209 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ZNF224Q9NZL3 707 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 VSX1Q9NZR4 365 aaPredicted RBP5.17□□□□□ -1.58
SSX3-201ENST00000298396 POFUT2Q9Y2G5 429 aa5.17□□□□□ -1.58
SSX3-201ENST00000298396 ARID1AO14497 2285 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 IGLV1-36A0A0B4J1U3 117 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 PRSS37A4D1T9 235 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 M0R3G1 203 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ARHGEF9O43307 516 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 ATP6V1G2O95670 118 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 SNAP29O95721 258 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 GPANK1O95872 356 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 IGHG1P01857 330 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 CD3EP07766 207 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 QDPRP09417 244 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 PSMB1P20618 241 aaKnown RBP5.16□□□□□ -1.58
SSX3-201ENST00000298396 GSTM3P21266 225 aa5.16□□□□□ -1.58
SSX3-201ENST00000298396 IGFBP5P24593 272 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms