RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TMEM212A6NML5 194 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 SIGLEC5O15389 551 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 IL33O95760 270 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 CTLA4P16410 223 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 SEC61A1P61619 476 aaKnown RBP22■■□□□ 1.11
SPTSSA-201ENST00000298130 SIGLEC14Q08ET2 396 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 ANKRD16Q6P6B7 361 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 C17orf107Q6ZR85 190 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 ZNF440Q8IYI8 595 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 MCHR2Q969V1 340 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 ZNF230Q9UIE0 474 aaPredicted RBP22■■□□□ 1.11
SPTSSA-201ENST00000298130 LOC100509620A0A075B734 347 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 UBE2QL1A1L167 161 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 TSPAN4O14817 238 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 OR2A4O95047 310 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 IL11P20809 199 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 DRD1P21728 446 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 MRPS10P82664 201 aaKnown RBP22■■□□□ 1.11
SPTSSA-201ENST00000298130 SORDQ00796 357 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 LMX1AQ8TE12 382 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 NKD1Q969G9 470 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 WBP1Q96G27 269 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 KLHDC7BQ96G42 594 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 TCTN2Q96GX1 697 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 OR2A7Q96R45 310 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 MRPL22Q9NWU5 206 aaKnown RBP22■■□□□ 1.11
SPTSSA-201ENST00000298130 NUP50Q9UKX7 468 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 CNTRLQ7Z7A1 2325 aa22■■□□□ 1.11
SPTSSA-201ENST00000298130 NUPL2O15504 423 aaKnown RBP21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 LMX1BO60663 402 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 MRPS21P82921 87 aaKnown RBP21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 TMUB2Q71RG4 321 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 TAS2R4Q9NYW5 299 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 LPLP06858 475 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 GUSBP08236 651 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 HLA-DOBP13765 273 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 PRKACBP22694 351 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 ADAM8P78325 824 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 INSM1Q01101 510 aaPredicted RBP21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 CDCA3Q99618 268 aaPredicted RBP21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 NPAS1Q99742 590 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 MESP1Q9BRJ9 268 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 NUDT9Q9BW91 350 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 FBXO4Q9UKT5 387 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 hCG_1807616A0A1W2PRN6 198 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 SPDEFO95238 335 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 IGF2P01344 180 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 APEHP13798 732 aaKnown RBP21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 CAPZBP47756 277 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 SPOCK1Q08629 439 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 SLC17A1Q14916 467 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 DEFB133Q30KQ1 61 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 KIAA0895LQ68EN5 471 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 OR2AK2Q8NG84 335 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 LANCL2Q9NS86 450 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 FBXL2Q9UKC9 423 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 KCNMB2Q9Y691 235 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 THADAQ6YHU6 1953 aa21.99■■□□□ 1.11
SPTSSA-201ENST00000298130 TXNDC12O95881 172 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 PRSS3P35030 304 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 PPICP45877 212 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 SKP1P63208 163 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 RAB11BQ15907 218 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 TUSC1Q2TAM9 212 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 GLYATL3Q5SZD4 288 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 OR1J4Q8NGS1 313 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 GPR119Q8TDV5 335 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 TINAGL1Q9GZM7 467 aaPredicted RBP21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 FARSAQ9Y285 508 aaKnown RBP21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 IL5P05113 134 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 NMBP08949 121 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 S100A11P31949 105 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 DLX5P56178 289 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 BTN1A1Q13410 526 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 KRT77Q7Z794 578 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 OR8B4Q96RC9 309 aa21.98■■□□□ 1.11
SPTSSA-201ENST00000298130 LOC101059948A0A1B0GTJ6 334 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 TEX51A0A1B0GUA7 166 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 SNRPGP15A8MWD9 76 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 ALOX12BO75342 701 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 BGLAPP02818 100 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 M6PRP20645 277 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 IL12BP29460 328 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 GABRA4P48169 554 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 EGR3Q06889 387 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 C1orf189Q5VU69 101 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 LINC00346Q8IVM7 164 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 RELL2Q8NC24 303 aaPredicted RBP21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 LIPHQ8WWY8 451 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 MARVELD3Q96A59 401 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 MRPL38Q96DV4 380 aaKnown RBP21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 PTDSS2Q9BVG9 487 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 REG4Q9BYZ8 158 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 POFUT1Q9H488 388 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 KIF26BQ2KJY2 2108 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 UNC13CQ8NB66 2214 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 F5H5P2 479 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 SLC25A12O75746 678 aa21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 LDOC1O95751 146 aaPredicted RBP21.97■■□□□ 1.11
SPTSSA-201ENST00000298130 FAUP35544 74 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms