RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 KIR2DS3K7RE56 304 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 SDC3O75056 442 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 TSPAN9O75954 239 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 AQP8O94778 261 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 RPA2P15927 270 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 TPMTP51580 245 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 HHEXQ03014 270 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 C1orf61Q13536 156 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 ZNF273Q14593 569 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 KIR2DS5Q14953 304 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 FAM122CQ6P4D5 195 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 TFAP2EQ6VUC0 442 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 TMED4Q7Z7H5 227 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 OR6K3Q8NGY3 331 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 GPX8Q8TED1 209 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 OR8B4Q96RC9 309 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 ZC4H2Q9NQZ6 224 aa11.96□□□□□ -0.5
SLC28A1-201ENST00000286749 KIF26BQ2KJY2 2108 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 TRAV14DV4A0A0A6YYC5 116 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 D6RAR5 112 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 M0QYG6 137 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 SMAD9O15198 467 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 UTS2O95399 124 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 PNPP00491 289 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 PLGP00747 810 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 ITGB2P05107 769 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 CFPP27918 469 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 MMABQ96EY8 250 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 PRODH2Q9UF12 536 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 ZNF230Q9UIE0 474 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 PCNX3Q9H6A9 2034 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 TMEM82A0PJX8 343 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 RFPL4AA6NLU0 287 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 C17orf51A8MQB3 221 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 C17orf105B2RV13 164 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 RFPL4AL1F8VTS6 287 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 PHYHO14832 338 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 LINC01565O15544 149 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 RAB3DO95716 219 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 ACTBP60709 375 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 ACTG1P63261 375 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 EIF2B5Q13144 721 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 SLC17A1Q14916 467 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 LY6G6FQ5SQ64 297 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 C1QL3Q5VWW1 255 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 FBXO46Q6PJ61 603 aaPredicted RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 OR52H1Q8NGJ2 320 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 OR1J4Q8NGS1 313 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 NXF5Q9H1B4 397 aaKnown RBP11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 C1orf198Q9H425 327 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 DZANK1Q9NVP4 752 aa11.95□□□□□ -0.5
SLC28A1-201ENST00000286749 HPP00738 406 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 OR4E1P0C645 316 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 SKP1P63208 163 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 MFGE8Q08431 387 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 PRR22Q8IZ63 422 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 GALNT16Q8N428 558 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 C12orf45Q8N5I9 185 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 AIFM2Q9BRQ8 373 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 PBX4Q9BYU1 374 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 RTN4RQ9BZR6 473 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 TINAGL1Q9GZM7 467 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 LDAHQ9H6V9 325 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 TMEM184BQ9Y519 407 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 FREM3P0C091 2139 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 HSPB2A8KAH6 182 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 H3BUI4 141 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 XKRYO14609 159 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 PMS2P2O95744 297 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 SPARCP09486 303 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 TAS2R19P59542 299 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 CCINQ13939 588 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 HSPB2Q16082 182 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 TMEM225Q6GV28 225 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 FAM166AQ6J272 317 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 FDX2Q6P4F2 183 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 TMEM205Q6UW68 189 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 NDUFAF7Q7L592 441 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 ZNF546Q86UE3 836 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 STEAP2Q8NFT2 490 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 CCDC107Q8WV48 283 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 RELTQ969Z4 430 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 MRPS24Q96EL2 167 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 UPB1Q9UBR1 384 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 EPHA6Q9UF33 1036 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 GLS2Q9UI32 602 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 DHDHQ9UQ10 334 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 THADAQ6YHU6 1953 aa11.94□□□□□ -0.5
SLC28A1-201ENST00000286749 OR5K4A6NMS3 321 aa11.93□□□□□ -0.5
SLC28A1-201ENST00000286749 B4DGG1 531 aa11.93□□□□□ -0.5
SLC28A1-201ENST00000286749 TOR1AO14656 332 aa11.93□□□□□ -0.5
SLC28A1-201ENST00000286749 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
SLC28A1-201ENST00000286749 IL33O95760 270 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms