RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 FAM3CQ92520 227 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 PRRG4Q9BZD6 226 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 PIGMQ9H3S5 423 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 GAREM1Q9H706 876 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 SLC22A11Q9NSA0 550 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 WDPCPO95876 746 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 BLKP51451 505 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 BTG2P78543 158 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 FAM78AQ5JUQ0 283 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 AKR1C8PQ5T2L2 129 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 FAM69BQ5VUD6 431 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 ZNF770Q6IQ21 691 aaPredicted RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 CPEB2Q7Z5Q1 589 aaKnown RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 ANGPTL5Q86XS5 388 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 OR52H1Q8NGJ2 320 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 OR1S2Q8NGQ3 325 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 MARCH1Q8TCQ1 289 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 RBM24Q9BX46 236 aaKnown RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 CHST6Q9GZX3 395 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 RNF215Q9Y6U7 377 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 CENPFP49454 3210 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 PLPP2O43688 288 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 MPC2O95563 127 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 SNRPEP62304 92 aaKnown RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 S100A12P80511 92 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 MEF2DQ14814 521 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 PLEKHN1Q494U1 663 aaPredicted RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 WBP2NLQ6ICG8 309 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 WDSUB1Q8N9V3 476 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 OR11A1Q9GZK7 315 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 GHITMQ9H3K2 345 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 PRDM7Q9NQW5 492 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 PRR13Q9NZ81 148 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 DHCR7Q9UBM7 475 aaKnown RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 KIF25Q9UIL4 384 aa14.34□□□□□ -0.11
USP43-201ENST00000285199 COA3Q9Y2R0 106 aaPredicted RBP14.34□□□□□ -0.11
USP43-201ENST00000285199 FAM230AA0A1W2PPH8 454 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 SLC22A23A1A5C7 686 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 ZNF264O43296 627 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 GJA4P35212 333 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 SGPP2Q8IWX5 399 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 KLHDC7BQ96G42 594 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 UBQLN4Q9NRR5 601 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 TCRBV21S2A2A0A5A6 115 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 OR6C68A6NDL8 312 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 P2RX6O15547 441 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 ZNF41P51814 821 aaPredicted RBP14.33□□□□□ -0.12
USP43-201ENST00000285199 UBXN2BQ14CS0 331 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 SORCS2Q96PQ0 1159 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 ADGRL4Q9HBW9 690 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 PDE7BQ9NP56 450 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 PCDHGA9Q9Y5G4 932 aaKnown RBP14.33□□□□□ -0.12
USP43-201ENST00000285199 METTL12A8MUP2 240 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 H7C1Q1 480 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 ZNF354AO60765 605 aaPredicted RBP14.33□□□□□ -0.12
USP43-201ENST00000285199 ENPP1P22413 925 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 NTSR1P30989 418 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 DUSP8Q13202 625 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 PPA1Q15181 289 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 ARHGAP11BQ3KRB8 267 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 OR10AC1Q8NH08 325 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 OR4C3Q8NH37 302 aa14.33□□□□□ -0.12
USP43-201ENST00000285199 SBF2Q86WG5 1849 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 ALDH3B1P43353 468 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 ATP1B3P54709 279 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 KIR2DS3Q14952 304 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 BATFQ16520 125 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 TANGO2Q6ICL3 276 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 NAA40Q86UY6 237 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 SULF2Q8IWU5 870 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 RCBTB1Q8NDN9 531 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 OR5D14Q8NGL3 314 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 OR2G2Q8NGZ5 317 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 MIB2Q96AX9 1013 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 C19orf53Q9UNZ5 99 aaPredicted RBP14.32□□□□□ -0.12
USP43-201ENST00000285199 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.32□□□□□ -0.12
USP43-201ENST00000285199 COL24A1Q17RW2 1714 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 PRAMEF27A3QJZ7 478 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 LINC00862A6NCI5 91 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 SULT1B1O43704 296 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 SULT1A3P0DMM9 295 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 SULT1A4P0DMN0 295 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 CXCL2P19875 107 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 NR0B2Q15466 257 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 CDKN3Q16667 212 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 LAMTOR1Q6IAA8 161 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 DCXRQ7Z4W1 244 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 OR1E3Q8WZA6 343 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 RAB3CQ96E17 227 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 FBXO17Q96EF6 278 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 SLC25A21Q9BQT8 299 aaPredicted RBP14.32□□□□□ -0.12
USP43-201ENST00000285199 OR10A5Q9H207 317 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP43-201ENST00000285199 SLCO1C1Q9NYB5 712 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 COL11A1P12107 1806 aaPredicted RBP14.32□□□□□ -0.12
USP43-201ENST00000285199 A0A0A6YYD5 115 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 TRIM77I1YAP6 450 aa14.32□□□□□ -0.12
USP43-201ENST00000285199 CNOT4O95628 575 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms