RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PROKR2Q8NFJ6 384 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 OR2T33Q8NG76 320 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 OR10H5Q8NGA6 315 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SMAP2Q8WU79 429 aaPredicted RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 PYDC1Q8WXC3 89 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 LRTOMTQ8WZ04 291 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 NINJ1Q92982 152 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 STMN2Q93045 179 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 PIGTQ969N2 578 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SLCO4A1Q96BD0 722 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 PERPQ96FX8 193 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 GPX7Q96SL4 187 aaPredicted RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 NMNAT3Q96T66 252 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 NIPSNAP1Q9BPW8 284 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 BDH2Q9BUT1 245 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 PLA2G12AQ9BZM1 189 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SEMA6AQ9H2E6 1030 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 OR51B6Q9H340 312 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 CXorf56Q9H5V9 222 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 CDH20Q9HBT6 801 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SRA1Q9HD15 236 aaKnown RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 EMC7Q9NPA0 242 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 FBXL3Q9UKT7 428 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 SAC3D1A6NKF1 404 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 RIIAD1A6NNX1 92 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 C12orf71A8MTZ7 269 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 FAM171A2A8MVW0 826 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 SHISA9B4DS77 424 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 G3V2T6 193 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 IMPA2O14732 288 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 PTHP01270 115 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 IGKV3-15P01624 115 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 FAM157BP0CG42 384 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CCL2P13500 99 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 APEHP13798 732 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 ANXA8P13928 327 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CTLA4P16410 223 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ZNF3P17036 446 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ZNF32P17041 273 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CRABP1P29762 137 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CALCRP30988 508 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CDKN1AP38936 164 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CDKN2AP42771 156 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 PCBD1P61457 104 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 MRPS34P82930 218 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 DBPQ10586 325 aaPredicted RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 SNTB2Q13425 540 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 DAG1Q14118 895 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ATP6AP1Q15904 470 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ETFDHQ16134 617 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 TBC1D28Q2M2D7 210 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 DEFB113Q30KQ7 82 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 PABPC1L2AQ5JQF8 200 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 C1QTNF12Q5T7M4 302 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 AGAP6Q5VW22 663 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ZNF770Q6IQ21 691 aaPredicted RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 SHQ1Q6PI26 577 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 SLC25A47Q6Q0C1 308 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 B3GLCTQ6Y288 498 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 PTCHD4Q6ZW05 846 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 DPPA2Q7Z7J5 298 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 MYPOPQ86VE0 399 aaPredicted RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 ZDHHC13Q8IUH4 622 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 GLB1L2Q8IW92 636 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ZNF611Q8N823 705 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 CYB561A3Q8NBI2 242 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 PAPD5Q8NDF8 572 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 SLC30A7Q8NEW0 376 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 OR8D4Q8NGM9 314 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 OR9Q1Q8NGQ5 310 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 OR5K1Q8NHB7 308 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 AKR7LQ8NHP1 331 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 FGFBP3Q8TAT2 258 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 UTP4Q969X6 686 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 FBXO17Q96EF6 278 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 PLEKHA8Q96JA3 519 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 TSSK2Q96PF2 358 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 DHRS9Q9BPW9 319 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 TMEM204Q9BSN7 226 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 TEX12Q9BXU0 123 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 DGCR6LQ9BY27 220 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 NUAK2Q9H093 628 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 SIAEQ9HAT2 523 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 POLE4Q9NR33 117 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 PAPOLBQ9NRJ5 636 aaKnown RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 KRT84Q9NSB2 600 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 ZNF224Q9NZL3 707 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 BAIAP2Q9UQB8 552 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 SPEF1Q9Y4P9 236 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 UGT2A1Q9Y4X1 527 aa5.68□□□□□ -1.5
CD44-204ENST00000279452 USP9YO00507 2555 aaPredicted RBP5.68□□□□□ -1.5
CD44-204ENST00000279452 INTS1Q8N201 2190 aaKnown RBP5.67□□□□□ -1.5
CD44-204ENST00000279452 IGHV2OR16-5A0A0B4J2B6 119 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 C5orf49A4QMS7 147 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ARRDC5A6NEK1 342 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 ERICH4A6NGS2 130 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 E7EQL1 145 aa5.67□□□□□ -1.5
CD44-204ENST00000279452 BHLHE40O14503 412 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms