RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 ECSITQ9BQ95 431 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 SIKE1Q9BRV8 207 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 ZNF665Q9H7R5 613 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 NANOGQ9H9S0 305 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 SAP30LQ9HAJ7 183 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 C20orf141Q9NUB4 165 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 BAG5Q9UL15 447 aa10.9□□□□□ -0.66
CD44-203ENST00000278386 IGHV1-69-2A0A0G2JMI3 117 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 CENPBD1B2RD01 187 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 FBP2O00757 339 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 PIP5K1CO60331 668 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 EDF1O60869 148 aaKnown RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 OR5F1O95221 314 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 VENTXO95231 258 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 NR2C1P13056 603 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 GCH1P30793 250 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 CDAP32320 146 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 ACTG1P63261 375 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 FMODQ06828 376 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 SGCAQ16586 387 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 MOGQ16653 247 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 HIST3H3Q16695 136 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 C10orf128Q5T292 105 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 NANOGP8Q6NSW7 305 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 FAHD2BQ6P2I3 314 aaPredicted RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 ZNF771Q7L3S4 317 aaPredicted RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 SEMA6DQ8NFY4 1073 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 MOSPD2Q8NHP6 518 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 ZNF418Q8TF45 676 aaPredicted RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 FAHD2AQ96GK7 314 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 TMEM120AQ9BXJ8 343 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 MRPL13Q9BYD1 178 aaKnown RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 POLR2J2Q9GZM3 115 aaKnown RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 POLR2J3Q9H1A7 115 aaKnown RBP10.89□□□□□ -0.67
CD44-203ENST00000278386 MED31Q9Y3C7 131 aa10.89□□□□□ -0.67
CD44-203ENST00000278386 C5orf49A4QMS7 147 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 GMNCA6NCL1 334 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 MRASO14807 208 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 MPZL1O95297 269 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 IFNA14P01570 189 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 MMP7P09237 267 aaPredicted RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 ANPEPP15144 967 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 ZNF32P17041 273 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 STOMP27105 288 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 OR1E2P47887 323 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 GDI2P50395 445 aaKnown RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 GZMMP51124 257 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 ZNF81P51508 661 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 LMO4P61968 165 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 ERVK-25P63136 954 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 MRPS34P82930 218 aaKnown RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 PIN1Q13526 163 aaPredicted RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 HFEQ30201 348 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 ALG10Q5BKT4 473 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 ACSM5Q6NUN0 579 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 ERICH5Q6P6B1 374 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 UNQ6126/PRO20091Q6UXV3 157 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 OR8J3Q8NGG0 315 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 AKR7LQ8NHP1 331 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 IPCEF1Q8WWN9 437 aaPredicted RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 ELMOD3Q96FG2 381 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 TIMD4Q96H15 378 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 SIAEQ9HAT2 523 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 NKIRAS2Q9NYR9 191 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 EIF3KQ9UBQ5 218 aaKnown RBP10.88□□□□□ -0.67
CD44-203ENST00000278386 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 WIPI2Q9Y4P8 454 aa10.88□□□□□ -0.67
CD44-203ENST00000278386 LOC105371242A0A075B767 164 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 A0A0A6YYJ9 748 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 IGKV1D-43A0A0B4J1Z2 117 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 A0A0G2JMP0 313 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 A0A0X1KG70 313 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 A0A1W2PPL8 197 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 PLSCR5A0PG75 271 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 ISPDA4D126 451 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 SPRY3O43610 288 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 MGRN1O60291 552 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 IGF2P01344 180 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 EPHA1P21709 976 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 IFNA8P32881 189 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 MPV17P39210 176 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 WNT5AP41221 380 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 CRYBB2P43320 205 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 ZNF718Q3SXZ3 478 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 ARMC4Q5T2S8 1044 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 IGFN1Q86VF2 1251 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 CALHM3Q86XJ0 350 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 ZNF101Q8IZC7 436 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 CPEB3Q8NE35 698 aaKnown RBP10.87□□□□□ -0.67
CD44-203ENST00000278386 OR4M2Q8NGB6 313 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 LRRC58Q96CX6 371 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 TPD52L3Q96J77 140 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 SEPHS2Q99611 448 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 GAL3ST1Q99999 423 aa10.87□□□□□ -0.67
CD44-203ENST00000278386 TXNIPQ9H3M7 391 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms