RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PLCXD1Q9NUJ7 323 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 DCAF13Q9NV06 445 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 RMND1Q9NWS8 449 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 NDE1Q9NXR1 346 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 MRPL39Q9NYK5 338 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 RNF7Q9UBF6 113 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 IL36AQ9UHA7 158 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 SLC22A13Q9Y226 551 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 EIF3LQ9Y262 564 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 V9GYY9 64 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 A0A0C4DFX4 3053 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 BRWD1Q9NSI6 2320 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PTPRJQ12913 1337 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 MUC3AQ02505 3323 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TECTAO75443 2155 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 A0A0J9YVX5 310 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TEX13DA0A0J9YY54 714 aaPredicted RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 GOLGA6L9A6NEM1 432 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PRR23AA6NEV1 266 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 LMO7DNF2Z398 122 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 J3KR12 359 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 GOSR2O14653 212 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PRMT5O14744 637 aaPredicted RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 P2RX6O15547 441 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PSTPIP1O43586 416 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 IDH3BO43837 385 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 STX10O60499 249 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 CA1P00915 261 aaPredicted RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 KLK1P06870 262 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 SNRPAP09012 282 aaKnown RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 OCM2P0CE71 109 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 GP1BBP13224 206 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 POLR2EP19388 210 aaKnown RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 CCNE1P24864 410 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 COILP38432 576 aaPredicted RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 BDKRB1P46663 353 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 GNPDA1P46926 289 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 CXCL12P48061 93 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 ALDH3B2P48448 385 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PDX1P52945 283 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TAF10Q12962 218 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 RUNX3Q13761 415 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 DAZAP2Q15038 168 aaPredicted RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 DUOXA1Q1HG43 343 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TMEM249Q2WGJ8 235 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 CEP85LQ5SZL2 805 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 SDHAF4Q5VUM1 108 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 LRRC31Q6UY01 552 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 ZNF793Q6ZN11 406 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 LINC00336Q6ZUF6 198 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 ASCL5Q7RTU5 278 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 OR2W3Q7Z3T1 314 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TMEM150AQ86TG1 271 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 UNC93AQ86WB7 457 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TMEM25Q86YD3 366 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 LINC00518Q8N0U6 118 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 GBGT1Q8N5D6 347 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 KLHDC1Q8N7A1 406 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 CCDC71LQ8N9Z2 235 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 ZNF738Q8NE65 137 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 OR5T2Q8NGG2 359 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 OR6Q1Q8NGQ2 317 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 OR1B1Q8NGR6 318 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 ACTL9Q8TC94 416 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 GPR148Q8TDV2 347 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 SMAP2Q8WU79 429 aaPredicted RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 PHF10Q8WUB8 498 aaKnown RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 UBE2E3Q969T4 207 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 APH1AQ96BI3 265 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 KCNA7Q96RP8 456 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 TIMM29Q9BSF4 260 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 FEM1AQ9BSK4 669 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 POLDIP3Q9BY77 421 aaKnown RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 ELOVL4Q9GZR5 314 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 COMMD4Q9H0A8 199 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 ALG9Q9H6U8 611 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 HRASLSQ9HDD0 168 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 PLEKHJ1Q9NW61 149 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 C1orf109Q9NX04 203 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 NDRG2Q9UN36 371 aaKnown RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 MRPS28Q9Y2Q9 187 aaKnown RBP3.95□□□□□ -1.78
CD44-202ENST00000278385 ATG2AQ2TAZ0 1938 aa3.95□□□□□ -1.78
CD44-202ENST00000278385 NSG1A0A0A6YYJ2 146 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 A0A1W2PQL4 384 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC22A20A6NK97 555 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TMEM238C9JI98 176 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 E5RJQ4 531 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 G3V4G9 280 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 ZNF195O14628 629 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SLC9A3R1O14745 358 aaPredicted RBP3.94□□□□□ -1.78
CD44-202ENST00000278385 TNFSF11O14788 317 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 SGCEO43556 437 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 HCRTO43612 131 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 RCBTB2O95199 551 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 PSMG1O95456 288 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 CD160O95971 181 aa3.94□□□□□ -1.78
CD44-202ENST00000278385 MBL2P11226 248 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms