RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ATRAIDQ6UW56 229 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 SYT9Q86SS6 491 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 LRRTM1Q86UE6 522 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ARMC10Q8N2F6 343 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 CCDC107Q8WV48 283 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ZCCHC14Q8WYQ9 949 aaKnown RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 LRRC46Q96FV0 321 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 CCDC74BQ96LY2 380 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 MFFQ9GZY8 342 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 APMAPQ9HDC9 416 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ASPMQ8IZT6 3477 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 CCDC187A0A096LP49 1063 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 TRBV5-7A0A0A0MS05 114 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 DNAJB6O75190 326 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF254O75437 659 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 NDUFB2O95178 105 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 ITGB2P05107 769 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 C8orf89P0DMQ9 161 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 CLUP10909 449 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 FUT1P19526 365 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 MST1P26927 711 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 SLC16A1P53985 500 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 GABREP78334 506 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 PON3Q15166 354 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 C10orf91Q5T1B1 145 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 WDR74Q6RFH5 385 aaPredicted RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 STAC2Q6ZMT1 411 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 PGAP1Q75T13 922 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF595Q8IYB9 648 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 RFLNBQ8N5W9 214 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 KDF1Q8NAX2 398 aaPredicted RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 OR5M1Q8NGP8 315 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 RGP1Q92546 391 aaPredicted RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 TRIM2Q9C040 744 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 STRADBQ9C0K7 418 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 CCDC86Q9H6F5 360 aaKnown RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 UPB1Q9UBR1 384 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 SNRNP200O75643 2136 aaKnown RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 USP24Q9UPU5 2620 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 FREM2Q5SZK8 3169 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 FXYD6-FXYD2A0A087WZ82 144 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 A0A1B0GTI1 187 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 A0A1W2PS29 197 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 TMEM8BA6NDV4 472 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 BRINP1O60477 761 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 IGF2P01344 180 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 SMIM10L1P0DMW3 83 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 HLA-GP17693 338 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 LSSP48449 732 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 PPM1FP49593 454 aaPredicted RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 SCRN3Q0VDG4 424 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 LTB4RQ15722 352 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 Q499Y3 187 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 DCST2Q5T1A1 773 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 MTFR2Q6P444 385 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 TMEM71Q6P5X7 295 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 ANKRD16Q6P6B7 361 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 DPY19L2P2Q6ZN68 376 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 CDRT4Q8N9R6 151 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 OR4C16Q8NGL9 310 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 RSC1A1Q92681 617 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 SMIM10Q96HG1 83 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 GPX7Q96SL4 187 aaPredicted RBP9.35□□□□□ -0.91
UPF3B-201ENST00000276201 MNTQ99583 582 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 GINS4Q9BRT9 223 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 FXYD6Q9H0Q3 95 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 KIR3DX1Q9H7L2 352 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 DKK4Q9UBT3 224 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 GNG8Q9UK08 70 aa9.35□□□□□ -0.91
UPF3B-201ENST00000276201 TRAV14DV4A0A0A6YYC5 116 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 APOC3P02656 99 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 TACSTD2P09758 323 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 CAPZBP47756 277 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 SLC25A1P53007 311 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 GFERP55789 205 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 C2orf68Q2NKX9 166 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 RAB11FIP2Q7L804 512 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 MUC20Q8N307 709 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 CYB561A3Q8NBI2 242 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 RCBTB1Q8NDN9 531 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 OR2L3Q8NG85 312 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 OR4K14Q8NGD5 310 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 WDR89Q96FK6 387 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 TNFRSF13CQ96RJ3 184 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 FERD3LQ96RJ6 166 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 CCNL2Q96S94 520 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 SLC19A3Q9BZV2 496 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 FBXL4Q9UKA2 621 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 LOXL2Q9Y4K0 774 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 HEBP2Q9Y5Z4 205 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 TRAV27A0A087WT01 109 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 CENPVL1A0A0U1RR11 272 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 A0A1W2PPK0 400 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 GOSR2O14653 212 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 RDH16O75452 317 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms