RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RGS9O75916 674 aaPredicted RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 MPZL1O95297 269 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 IL1AP01583 271 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 RPS19P39019 145 aaKnown RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 RPS27P42677 84 aaKnown RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 ZNF133P52736 654 aaPredicted RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 CLDN17P56750 224 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ROM1Q03395 351 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 HSPB2Q16082 182 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 BCL2A1Q16548 175 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ABLIM2Q6H8Q1 611 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 SLC18B1Q6NT16 456 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 TRILQ7L0X0 811 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 SLC22A16Q86VW1 577 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 SMIM19Q96E16 107 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 AMELYQ99218 206 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 HDHD5Q9BXW7 423 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 SLC6A15Q9H2J7 730 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 MMP27Q9H306 513 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ZNF716A6NP11 495 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 NPIPA2E9PIF3 369 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 NPIPA3F8WFD2 350 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 SC5DO75845 299 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ZNF432O94892 652 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 KRT8P05787 483 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 OR8G3PP0DMU2 310 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 EIF1AXP47813 144 aaKnown RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 CLDN18P56856 261 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ADAM8P78325 824 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 SLC3A1Q07837 685 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 FOXC1Q12948 553 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ZNF404Q494X3 552 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 PDSS1Q5T2R2 415 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 LIPNQ5VXI9 398 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 UBQLNLQ8IYU4 475 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 TMEM123Q8N131 208 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 FAM109AQ8N4B1 249 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 MS4A15Q8N5U1 240 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 MCFD2Q8NI22 146 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 THEM6Q8WUY1 208 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 GHSRQ92847 366 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 TMEM54Q969K7 222 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 MCHR2Q969V1 340 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 CPNE4Q96A23 557 aaPredicted RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 ZNF385AQ96PM9 386 aaKnown RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 OR2M2Q96R28 347 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 OR8B4Q96RC9 309 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 TIGARQ9NQ88 270 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 ING1Q9UK53 422 aaPredicted RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 CSAG2Q9Y5P2 127 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 CELSR3Q9NYQ7 3312 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 PSMD9O00233 223 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 GPRIN2O60269 458 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 AQP8O94778 261 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 SPARCP09486 303 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 ZNF708P17019 499 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 LAP3P28838 519 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 PSMB10P40306 273 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 GDI2P50395 445 aaKnown RBP14.54□□□□□ -0.08
TPM1-201ENST00000267996 SLC10A1Q14973 349 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 MEP1BQ16820 701 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 OTPQ5XKR4 325 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 LRFN4Q6PJG9 635 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 OR6Q1Q8NGQ2 317 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 ABHD4Q8TB40 342 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 SMAD5Q99717 465 aaKnown RBP14.54□□□□□ -0.08
TPM1-201ENST00000267996 TTYH2Q9BSA4 534 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 GALNT8Q9NY28 637 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 SLCO1C1Q9NYB5 712 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 GLTPQ9NZD2 209 aa14.54□□□□□ -0.08
TPM1-201ENST00000267996 SPTBN2O15020 2390 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 CD8B2A6NJW9 211 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 KLK10O43240 276 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 CYTIPO60759 359 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 CDRT1O95170 752 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 CD8BP10966 210 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 NR2C1P13056 603 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 ZNF823P16415 610 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 EDNRAP25101 427 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 NANOS3P60323 173 aaKnown RBP14.53□□□□□ -0.08
TPM1-201ENST00000267996 INSL4Q14641 139 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 KCNMB1Q16558 191 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 CARD17Q5XLA6 110 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 FAM220AQ7Z4H9 259 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 YIPF7Q8N8F6 280 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 C11orf40Q8WZ69 217 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 NSMAFQ92636 917 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 SLC25A46Q96AG3 418 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 INTS12Q96CB8 462 aaKnown RBP14.53□□□□□ -0.08
TPM1-201ENST00000267996 ABHD6Q9BV23 337 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 BARHL1Q9BZE3 327 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 KCNN2Q9H2S1 579 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 ZDHHC11Q9H8X9 412 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 RCE1Q9Y256 329 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 AKAP13Q12802 2813 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 CACNA1CQ13936 2221 aa14.53□□□□□ -0.08
TPM1-201ENST00000267996 TRBV2A0A0J9YWF9 115 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 ACOT7O00154 380 aa14.52□□□□□ -0.08
TPM1-201ENST00000267996 ACTL6AO96019 429 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms