RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 QDPRP09417 244 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SLC25A4P12235 298 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 GALNSP34059 522 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 GLP1RP43220 463 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 FAM78AQ5JUQ0 283 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 ZNF529Q6P280 563 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 BAP18Q8IXM2 172 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 C2orf73Q8N5S3 287 aaPredicted RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 OR2T33Q8NG76 320 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 HAVCR1Q96D42 359 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 ZNF587Q96SQ5 575 aaPredicted RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 ACTRT3Q9BYD9 372 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 BRF2Q9HAW0 419 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 MIEF1Q9NQG6 463 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 LPAR3Q9UBY5 353 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 MTFP1Q9UDX5 166 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 A6NNC1 897 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 PRR32B1ATL7 298 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 F8VVB4 439 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 F8VWA3 439 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 UGDHO60701 494 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 CTNSO60931 367 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 SOCS5O75159 536 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 ADH5P11766 374 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 PAX1P15863 534 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 IMPA1P29218 277 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 NAA10P41227 235 aaPredicted RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 TSFMP43897 325 aaKnown RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 ZNF84P51523 738 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 PKIAP61925 76 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 MRPS10P82664 201 aaKnown RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 CNTN1Q12860 1018 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 CDK5R1Q15078 307 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 NDUFAF6Q330K2 333 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 NKAIN2Q5VXU1 208 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 ZNF343Q6P1L6 599 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 PAPD4Q6PIY7 484 aaKnown RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 AMER3Q8N944 861 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 ZSCAN4Q8NAM6 433 aaPredicted RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 SLC30A7Q8NEW0 376 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 PFN4Q8NHR9 129 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 DTD1Q8TEA8 209 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 KIRREL1Q96J84 757 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 ZNF607Q96SK3 696 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 RPP25Q9BUL9 199 aaKnown RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 OPN3Q9H1Y3 402 aaPredicted RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 C1orf198Q9H425 327 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 PARPBPQ9NWS1 579 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 NOP16Q9Y3C1 178 aaKnown RBP7.96□□□□□ -1.13
VAPB-201ENST00000265619 MYO15AQ9UKN7 3530 aa7.96□□□□□ -1.13
VAPB-201ENST00000265619 DCTN6O00399 190 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 EFEMP2O95967 443 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 ITGB2P05107 769 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 ITGA5P08648 1049 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 F3P13726 295 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 NANOS3P60323 173 aaKnown RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 SLC7A9P82251 487 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 AIMP2Q13155 320 aaKnown RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 ATPAF1Q5TC12 328 aaPredicted RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 TMEM215Q68D42 235 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 TANGO2Q6ICL3 276 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 LCTLQ6UWM7 567 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 WDR88Q6ZMY6 472 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 Q6ZNB5 142 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 SLCO4C1Q6ZQN7 724 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 Q6ZVL8 140 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 C19orf47Q8N9M1 422 aaKnown RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 ZMYND19Q96E35 227 aaPredicted RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 C16orf58Q96GQ5 468 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 RIOK2Q9BVS4 552 aaKnown RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 TEX12Q9BXU0 123 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 PTGES2Q9H7Z7 377 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 DMRT3Q9NQL9 472 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 SIRT7Q9NRC8 400 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 PRR13Q9NZ81 148 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 B4GALT6Q9UBX8 382 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 GDF2Q9UK05 429 aaPredicted RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 CSAG2Q9Y5P2 127 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 NUP210Q8TEM1 1887 aaPredicted RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 A0A0G2JN53 185 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 TRBV2A0A0J9YWF9 115 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 A0A1B0GTH9 108 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 GXYLT2A0PJZ3 443 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 ZNF727A8MUV8 499 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 LRP3O75074 770 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 RDH16O75452 317 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 ZNF25P17030 456 aaPredicted RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 MAKP20794 623 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 S100A2P29034 98 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 GRPRP30550 384 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 PMELP40967 661 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 RPS10P46783 165 aaKnown RBP7.96□□□□□ -1.14
VAPB-201ENST00000265619 SULT1A1P50225 295 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 DNM1P46Q6ZS02 220 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 OVCH1Q7RTY7 1134 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 SMIM19Q96E16 107 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 ZNF845Q96IR2 970 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms