RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FAM214BQ7L5A3 538 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 HDDC2Q7Z4H3 204 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 LHFPL3Q86UP9 236 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 ERI1Q8IV48 349 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 UBE2J2Q8N2K1 259 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 STX19Q8N4C7 294 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 MBD3L2Q8NHZ7 208 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 APH1AQ96BI3 265 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 TM9SF2Q99805 663 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 TTYH2Q9BSA4 534 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 ULBP2Q9BZM5 246 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 RACGAP1Q9H0H5 632 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 SLCO5A1Q9H2Y9 848 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 TP63Q9H3D4 680 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 CRLF2Q9HC73 371 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 GPR35Q9HC97 309 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 EMC7Q9NPA0 242 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 PARPBPQ9NWS1 579 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 MOKQ9UQ07 419 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 EXOGQ9Y2C4 368 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 RTTNQ86VV8 2226 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 TRGV8A0A0C4DH27 118 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 EFCAB10A6NFE3 127 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 SNTNA6NMZ2 147 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 J3QRE1 110 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 MAGEB4O15481 346 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 DHHO43323 396 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 AHCYL1O43865 530 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 TNFSF13O75888 250 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 KRT33AO76009 404 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 FADS2O95864 444 aaKnown RBP8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 SBK2P0C263 348 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 GAAP10253 952 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 LAP3P28838 519 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 ETV1P50549 477 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 GABARAPL2P60520 117 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 ROR2Q01974 943 aaKnown RBP8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 RBPJQ06330 500 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 FAPQ12884 760 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 DOC2BQ14184 412 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 SF3B4Q15427 424 aaKnown RBP eCLIP8.58□□□□□ -1.042e-8■■■■■ 28
SNRNP40-201ENST00000263694 IGFBP7Q16270 282 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 SGCAQ16586 387 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 KLHL22Q53GT1 634 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 LCN1P1Q5VSP4 162 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 SSX6Q7RTT6 188 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 GLB1L2Q8IW92 636 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 TIGD4Q8IY51 512 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 ST6GALNAC3Q8NDV1 305 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 OR10H4Q8NGA5 316 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 IPCEF1Q8WWN9 437 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 C11orf40Q8WZ69 217 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 MYDGFQ969H8 173 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 TMEM80Q96HE8 168 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 SIGLEC11Q96RL6 698 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 MRPS18AQ9NVS2 196 aaKnown RBP8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 CNOT2Q9NZN8 540 aaKnown RBP8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 BLOC1S6Q9UL45 172 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 COPS3Q9UNS2 423 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 OSGIN2Q9Y236 505 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 KLHDC2Q9Y2U9 406 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 ESPL1Q14674 2120 aa8.58□□□□□ -1.04
SNRNP40-201ENST00000263694 C12orf71A8MTZ7 269 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 PRR32B1ATL7 298 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 CENPBD1B2RD01 187 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 PSMD9O00233 223 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF593O00488 134 aaPredicted RBP8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 RAB36O95755 333 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 IL2RAP01589 272 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 TMIGD3P0DMS9 266 aaPredicted RBP8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 PIPP12273 146 aaPredicted RBP8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 PTGER4P35408 488 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 OR3A2P47893 321 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 HSF2Q03933 536 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 GLO1Q04760 184 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 RAB40BQ12829 278 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 GGTLC2Q14390 218 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 C10orf128Q5T292 105 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 TMEM154Q6P9G4 183 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 DNM1P34Q6PK57 102 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF773Q6PK81 442 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 CORO6Q6QEF8 472 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 DPY19L4Q7Z388 723 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 LINC00346Q8IVM7 164 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 SLC35F2Q8IXU6 374 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 LRRC18Q8N456 261 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 SLC26A10Q8NG04 563 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 OR6N2Q8NGY6 317 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 STARD4Q96DR4 205 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 INTS14Q96SY0 518 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 CNN2Q99439 309 aaKnown RBP8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 OPN3Q9H1Y3 402 aaPredicted RBP8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 GP6Q9HCN6 339 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 FGF20Q9NP95 211 aaPredicted RBP8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 GLRX2Q9NS18 164 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 HAO2Q9NYQ3 351 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 UPB1Q9UBR1 384 aa8.57□□□□□ -1.04
SNRNP40-201ENST00000263694 DIMT1Q9UNQ2 313 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms