RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FPR3P25089 353 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 LGALS12Q96DT0 336 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 MBOAT4Q96T53 435 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 MED20Q9H944 212 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 GPR173Q9NS66 373 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 NECAP2Q9NVZ3 263 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SPRY3O43610 288 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 NUDT7P0C024 238 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 HEPHL1Q6MZM0 1159 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 GABRG1Q8N1C3 465 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 UTP4Q969X6 686 aaKnown RBP12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 SLCO4A1Q96BD0 722 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 FGGYQ96C11 551 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 ISOC1Q96CN7 298 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 KIRREL1Q96J84 757 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 TMEM38AQ9H6F2 299 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 SPACA1Q9HBV2 294 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 KIF25Q9UIL4 384 aa12.4□□□□□ -0.43
PDGFRB-201ENST00000261799 NUDT19A8MXV4 375 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 CRYZL1O95825 349 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 PIGAP37287 484 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF83P51522 516 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 NARFLQ9H6Q4 476 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 HSPB2A8KAH6 182 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 I6L893 689 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 K7EQM0 130 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 CR2P20023 1033 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 PCMT1P22061 227 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 HSPB2Q16082 182 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 HSD17B6O14756 317 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 RAB40ALP0C0E4 278 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 NFYAP23511 347 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 C21orf33P30042 268 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF93P35789 620 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 WIPI1Q5MNZ9 446 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 LSRQ86X29 649 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 OR4M1Q8NGD0 313 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 OR10J5Q8NHC4 309 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 RAB40AQ8WXH6 277 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 ST8SIA4Q92187 359 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 AMDHD2Q9Y303 409 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 GASTP01350 101 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 CLDN6P56747 220 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 PFN4Q8NHR9 129 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 REEP6Q96HR9 211 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 CMTM3Q96MX0 182 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 PPA2Q9H2U2 334 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 GLRX2Q9NS18 164 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 EMCNQ9ULC0 261 aa12.39□□□□□ -0.43
PDGFRB-201ENST00000261799 TMEM11P17152 192 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 RBP2P50120 134 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SOX8P57073 446 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 FAM71CQ8NEG0 241 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 OR4F15Q8NGB8 312 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TP63Q9H3D4 680 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 KCNG2Q9UJ96 466 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 F5H5P2 479 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 HTR2AP28223 471 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 HTD2P86397 168 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 MEP1BQ16820 701 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 WDR74Q6RFH5 385 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SYT9Q86SS6 491 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF649Q9BS31 505 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 CACNG6Q9BXT2 260 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 BCO1Q9HAY6 547 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 OR5H15A6NDH6 313 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SIRPB1O00241 398 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 GAPDHSO14556 408 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TNFSF12O43508 249 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 LCMT2O60294 686 aaKnown RBP12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 FTH1P19P0C7X4 201 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SMIM21Q3B7S5 101 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 OR7G2Q8NG99 324 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ELMOD3Q96FG2 381 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 UHRF2Q96PU4 802 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 S1PR3Q99500 378 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 F2RP25116 425 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 LAP3P28838 519 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 CDK5R2Q13319 367 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TEX29Q8N6K0 151 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TCTEX1D2Q8WW35 142 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SDF2Q99470 211 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms