RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CDC40O60508 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX56-201ENST00000258772 RAD1O60671 282 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 NUDT14O95848 222 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 IL12BP29460 328 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 PRSS3P35030 304 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 RPL27P61353 136 aaKnown RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 RAB11BQ15907 218 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 C2orf68Q2NKX9 166 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 Q6ZS52 159 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 HDDC2Q7Z4H3 204 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SLC38A6Q8IZM9 456 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 OR5M1Q8NGP8 315 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 LMX1AQ8TE12 382 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 PNPLA2Q96AD5 504 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 MSANTD3Q96H12 275 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 PTDSS2Q9BVG9 487 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 OPN4Q9UHM6 478 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 KIF25Q9UIL4 384 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 LOC100289279A0A1B0GTE1 492 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 EIF4E2O60573 245 aaKnown RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 SLC16A7O60669 478 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SLC25A12O75746 678 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 RGS11O94810 467 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SIX6O95475 246 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 AKAIN1P0CW23 69 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 GTF2F2P13984 249 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 H2BFSP57053 126 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SEC61A1P61619 476 aaKnown RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 INSM1Q01101 510 aaPredicted RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 MFSD13AQ14CX5 517 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SGCBQ16585 318 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 FAM166AQ6J272 317 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SLC18B1Q6NT16 456 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 CHMP1BQ7LBR1 199 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 ADGRG3Q86Y34 549 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 OR51S1Q8NGJ8 323 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 ZNF519Q8TB69 540 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 RLN3Q8WXF3 142 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 SLC17A5Q9NRA2 495 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 ZNF224Q9NZL3 707 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 ARID1BQ8NFD5 2236 aaPredicted RBP13.74□□□□□ -0.21
DDX56-201ENST00000258772 ARPC4-TTLL3A0A0A6YYG9 625 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 LOC105371267A0A1B0GV96 52 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 MEIS3P1A6NDR6 274 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 ALG1L2C9J202 215 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 SUSD5O60279 629 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 TSPAN2O60636 221 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 OR6A2O95222 327 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 MT-ATP6P00846 226 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 PGCP20142 388 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 LTBRP36941 435 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 NR0B1P51843 470 aaKnown RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 DCAF7P61962 342 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 OC90Q02509 493 aaPredicted RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 ZP2Q05996 745 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 EBPQ15125 230 aaKnown RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 GKN2Q86XP6 184 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 OMA1Q96E52 524 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 CHRNA10Q9GZZ6 450 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 RDH8Q9NYR8 311 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 EPHA6Q9UF33 1036 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 SPEF1Q9Y4P9 236 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 A0A1W2PQD3 144 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 TTLL8A6PVC2 850 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 HMSDA8MTL9 139 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 CD3DP04234 171 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 SPARCP09486 303 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 GP1BBP13224 206 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 ROM1Q03395 351 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 ELAVL1Q15717 326 aaKnown RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 ETFDHQ16134 617 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 HLA-DQA1Q5Y7H0 255 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 C9orf40Q8IXQ3 194 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 MUC20Q8N307 709 aaPredicted RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 PLPP7Q8NBV4 271 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 CLEC1AQ8NC01 280 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 OR2AK2Q8NG84 335 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 RBPMSQ93062 196 aaKnown RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 C8orf44Q96CB5 159 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 TBL1XR1Q9BZK7 514 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 TXNIPQ9H3M7 391 aa13.73□□□□□ -0.21
DDX56-201ENST00000258772 VSX1Q9NZR4 365 aaPredicted RBP13.73□□□□□ -0.21
DDX56-201ENST00000258772 IGLV1-36A0A0B4J1U3 117 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 TMEM272A0A1B0GTI8 110 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 H3BMH7 237 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 NPIPB7O75200 414 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 DXOO77932 396 aaKnown RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 FCER2P06734 321 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 NME1P15531 152 aaKnown RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 CTLA4P16410 223 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 S100A11P31949 105 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 EFNA3P52797 238 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms