RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 RAB33BQ9H082 229 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 RANBP3Q9H6Z4 567 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 LAMA5O15230 3695 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 ALG1L2C9J202 215 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 TPOP07202 933 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 KLK3P07288 261 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 UCHL1P09936 223 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 OTX2P32243 289 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 FOXF1Q12946 379 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 GFOD2Q3B7J2 385 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 ESX1Q8N693 406 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 ZNF248Q8NDW4 579 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 TSEN15Q8WW01 171 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 DIABLOQ9NR28 239 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 SLC22A13Q9Y226 551 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 U3KQA8 63 aa13.2□□□□□ -0.3
TRAFD1-201ENST00000257604 EML5Q05BV3 1969 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 GPR171O14626 319 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 FLRT2O43155 660 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 GLCEO94923 617 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 SIX6O95475 246 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 ALDOBP05062 364 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 IFNGR1P15260 489 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 THBS2P35442 1172 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 P2RX1P51575 399 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 CDK5R1Q15078 307 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 AANATQ16613 207 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 SFRP5Q5T4F7 317 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 FNDC7Q5VTL7 733 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 LRFN4Q6PJG9 635 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 CPEB2Q7Z5Q1 589 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 UBALD2Q8IYN6 164 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 NXPE2Q96DL1 559 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 PGLYRP3Q96LB9 341 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 TAS2R5Q9NYW4 299 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 DOCK7Q96N67 2140 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 LINC00862A6NCI5 91 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 M6PRP20645 277 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 BTG1P62324 171 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 TLE3Q04726 772 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 ZNF782Q6ZMW2 699 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 RBP7Q96R05 134 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 OR5B2Q96R09 309 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 ISYNA1Q9NPH2 558 aa13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 COA3Q9Y2R0 106 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-201ENST00000257604 CFAP47Q6ZTR5 3102 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 ATP6V1G2-DDX39BF2Z307 99 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 CTLA4P16410 223 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 ATF1P18846 271 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 ADH7P40394 386 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 TSPAN5P62079 268 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 ALKAL2Q6UX46 152 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 PRSS42Q7Z5A4 293 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 OR2T4Q8NH00 348 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 KCNK15Q9H427 330 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 FBXL2Q9UKC9 423 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 HIF3AQ9Y2N7 669 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 ASAH2BP0C7U1 165 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 PNLIPRP2P54317 469 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 Q6ZTK2 550 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 GNRHR2Q96P88 292 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 SORCS2Q96PQ0 1159 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 POLR1DQ9Y2S0 133 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 RPS10-NUDT3A0A1W2PQS6 291 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 PLPP2O43688 288 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 GMDSO60547 372 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 POLR2HP52434 150 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 MAP2K6P52564 334 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 GPR85P60893 370 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 DCAF7P61962 342 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 TMEM255AQ5JRV8 349 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 LINGO2Q7L985 606 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 TMEM156Q8N614 296 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 NUP50Q9UKX7 468 aa13.18□□□□□ -0.3
TRAFD1-201ENST00000257604 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 H0YC42 278 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 H2AFB2P0C5Z0 115 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 KLK2P20151 261 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 SLC6A8P48029 635 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 VEGFCP49767 419 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 ZNF41P51814 821 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 ACTA2P62736 377 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 ACTG2P63267 376 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 RIN1Q13671 783 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 MFSD13AQ14CX5 517 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 LINC01590Q5TEZ4 76 aa13.17□□□□□ -0.3
TRAFD1-201ENST00000257604 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms