RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LHX9Q9NQ69 397 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HAO2Q9NYQ3 351 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MRPS2Q9Y399 296 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM227AF5H4B4 570 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 G3V3Q6 166 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 RAMP3O60896 148 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 JTBO76095 146 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 IL5P05113 134 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 ANXA4P09525 319 aaPredicted RBP6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 HRH2P25021 359 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 GABRA5P31644 462 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 CAPZBP47756 277 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF628Q5EBL2 1059 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 DMRTC2Q8IXT2 367 aaPredicted RBP6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 OR2AK2Q8NG84 335 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 SEMA3CQ99985 751 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 G6PC3Q9BUM1 346 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 KATNB1Q9BVA0 655 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 RNF167Q9H6Y7 350 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 CNTD2Q9H8S5 307 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 IL26Q9NPH9 171 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 TAS2R5Q9NYW4 299 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 PCTPQ9UKL6 214 aa6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 CARHSP1Q9Y2V2 147 aaKnown RBP6.21□□□□□ -1.41
PDGFRA-201ENST00000257290 SMIM28A0A1B0GU29 152 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM183AA6NL82 134 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CFDP00746 253 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 SELPP16109 830 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 WNT7BP56706 349 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF92Q03936 586 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CTU2Q2VPK5 515 aaKnown RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ASCL4Q6XD76 172 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF620Q6ZNG0 422 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 MUC15Q8N387 334 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 OR2C3Q8N628 320 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 OR1S1Q8NH92 325 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM125Q96AQ2 219 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CAPNS2Q96L46 248 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 OR51I2Q9H344 312 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 GEMIN7Q9H840 131 aaKnown RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 LPAR2Q9HBW0 351 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CD84Q9UIB8 345 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 DHRS7CA6NNS2 312 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 SIX3O95343 332 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 GJB5O95377 273 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 IGF2P01344 180 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 PRSS3P35030 304 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 PDX1P52945 283 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 YBEYP58557 167 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TAS2R20P59543 309 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 SELENOTP62341 195 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 LDLRAD1Q5T700 205 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CAPN13Q6MZZ7 669 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 RPUSD3Q6P087 351 aaKnown RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR135Q8IZ08 494 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 SEC22AQ96IW7 307 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 HES2Q9Y543 173 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF593O00488 134 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TNFSF15O95150 251 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 FGF19O95750 216 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 C1RP00736 705 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 RHOCP08134 193 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ARRB2P32121 409 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CD96P40200 585 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 GABRA4P48169 554 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF136P52737 540 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TCL1AP56279 114 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 DNAJB13P59910 316 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM3AP98173 230 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 STUMQ69YW2 141 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 NPNTQ6UXI9 565 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM182Q6ZP80 229 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ZFP62Q8NB50 900 aaPredicted RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 OR2G3Q8NGZ4 309 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 OR1P1Q8NH06 330 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 OR5AK3PQ8NH89 298 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 PINX1Q96BK5 328 aaKnown RBP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 PRRT1Q99946 306 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 LRTM1Q9HBL6 345 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 G6PC2Q9NQR9 355 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 GABRQQ9UN88 632 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ASB1Q9Y576 335 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CROCCQ5TZA2 2017 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TRAV30A0A087WSZ9 112 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 EREGO14944 169 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 DPP4P27487 766 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TAS2R30P59541 319 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TUSC3Q13454 348 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 GAB1Q13480 694 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TEAD2Q15562 447 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 EXT1Q16394 746 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CPSF6Q16630 551 aaKnown RBP eCLIP6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 ST3GAL2Q16842 350 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 PAQR3Q6TCH7 311 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 PNPLA2Q96AD5 504 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM131CQ96AQ9 280 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 TRIB1Q96RU8 372 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 SORT1Q99523 831 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 CHST5Q9GZS9 411 aa6.21□□□□□ -1.42
PDGFRA-201ENST00000257290 HES4Q9HCC6 221 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms