RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SYT9Q86SS6 491 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 PIANPQ8IYJ0 282 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 NEIL2Q969S2 332 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 INTS12Q96CB8 462 aaKnown RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 MEGF10Q96KG7 1140 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 SGPP1Q9BX95 441 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 C1QTNF3Q9BXJ4 246 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 DEFB126Q9BYW3 111 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 MEIKINA0A087WXM9 373 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 FAM227AF5H4B4 570 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 K7ERQ8 282 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 MPPED1O15442 326 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 DTYMKP23919 212 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 RBP2P50120 134 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 TPBGQ13641 420 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 ETFDHQ16134 617 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 YOD1Q5VVQ6 348 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR2A2Q6IF42 318 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF761Q86XN6 746 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC43A2Q8N370 569 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 PSMF1Q92530 271 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 BADQ92934 168 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 RAB7BQ96AH8 199 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 PHYHIPLQ96FC7 376 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 ADAM29Q9UKF5 820 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 CITO14578 2027 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 C4AP0C0L4 1744 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 RPLP1P05386 114 aaKnown RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 APEHP13798 732 aaKnown RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 VIPR2P41587 438 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 ELLP55199 621 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 UBE2G2P60604 165 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 HLXQ14774 488 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 C6orf132Q5T0Z8 1188 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF485Q8NCK3 441 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR5L2Q8NGL0 311 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 OPALINQ96PE5 141 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 LMAN1LQ9HAT1 526 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 FBXL12Q9NXK8 326 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC23A2Q9UGH3 650 aa12.13□□□□□ -0.47
PCDHGA3-201ENST00000253812 B4GALT3O60512 393 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 STC2O76061 302 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 APBB3O95704 486 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF250P15622 560 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 POU3F3P20264 500 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 SOX18P35713 384 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 NOVA1P51513 510 aaKnown RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 KCNJ10P78508 379 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF776Q68DI1 518 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 FAM3CQ92520 227 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 IRF7Q92985 503 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 UBL7Q96S82 380 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 DOK1Q99704 481 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 RTP3Q9BQQ7 232 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 WDR76Q9H967 626 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 POLMQ9NP87 494 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 NPIPA5A0A0B4J1W7 369 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 FITM1A5D6W6 292 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF593O00488 134 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 TM4SF4P48230 202 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 SULT1A2P50226 295 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 GGTA1PQ4G0N0 100 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 RAET1LQ5VY80 246 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 ANKRD16Q6P6B7 361 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 MFSD4AQ8N468 514 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 FAM71CQ8NEG0 241 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 HLA-CQ95604 372 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 LDAHQ9H6V9 325 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 FKRPQ9H9S5 495 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 RFC3P40938 356 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 CARD18P57730 90 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR2W3Q7Z3T1 314 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 TSTD1Q8NFU3 115 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 POM121Q96HA1 1249 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 NENFQ9UMX5 172 aa12.12□□□□□ -0.47
PCDHGA3-201ENST00000253812 LINC00862A6NCI5 91 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 LMNTD1Q8N9Z9 388 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 SERINC2Q96SA4 455 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 PCED1AQ9H1Q7 454 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 RPH3ALQ9UNE2 315 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms