RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 UGT2B15P54855 530 aa8.78□□□□□ -1
VPS50-201ENST00000251739 CCL8P80075 99 aa8.78□□□□□ -1
VPS50-201ENST00000251739 MRPS34P82930 218 aaKnown RBP8.78□□□□□ -1
VPS50-201ENST00000251739 RPL18Q07020 188 aaKnown RBP8.78□□□□□ -1
VPS50-201ENST00000251739 NKPD1Q17RQ9 610 aa8.78□□□□□ -1
VPS50-201ENST00000251739 PCGF3Q3KNV8 242 aa8.78□□□□□ -1
VPS50-201ENST00000251739 SLC36A2Q495M3 483 aa8.78□□□□□ -1
VPS50-201ENST00000251739 TTMPQ5BVD1 217 aa8.78□□□□□ -1
VPS50-201ENST00000251739 TMEM255AQ5JRV8 349 aa8.78□□□□□ -1
VPS50-201ENST00000251739 ARMC4Q5T2S8 1044 aa8.78□□□□□ -1
VPS50-201ENST00000251739 TTC33Q6PID6 262 aaPredicted RBP8.78□□□□□ -1
VPS50-201ENST00000251739 USP43Q70EL4 1123 aa8.78□□□□□ -1
VPS50-201ENST00000251739 CCDC80Q76M96 950 aa8.78□□□□□ -1
VPS50-201ENST00000251739 NANOGNBQ7Z5D8 188 aa8.78□□□□□ -1
VPS50-201ENST00000251739 SYNPRQ8TBG9 265 aa8.78□□□□□ -1
VPS50-201ENST00000251739 LIPHQ8WWY8 451 aa8.78□□□□□ -1
VPS50-201ENST00000251739 ASB10Q8WXI3 467 aa8.78□□□□□ -1
VPS50-201ENST00000251739 GTF3AQ92664 365 aaKnown RBP8.78□□□□□ -1
VPS50-201ENST00000251739 MCHR2Q969V1 340 aa8.78□□□□□ -1
VPS50-201ENST00000251739 NABP1Q96AH0 204 aa8.78□□□□□ -1
VPS50-201ENST00000251739 LRRC37BQ96QE4 947 aa8.78□□□□□ -1
VPS50-201ENST00000251739 ZNF347Q96SE7 839 aa8.78□□□□□ -1
VPS50-201ENST00000251739 ZNF665Q9H7R5 613 aa8.78□□□□□ -1
VPS50-201ENST00000251739 LIN7BQ9HAP6 207 aa8.78□□□□□ -1
VPS50-201ENST00000251739 CDH20Q9HBT6 801 aa8.78□□□□□ -1
VPS50-201ENST00000251739 LPAR2Q9HBW0 351 aa8.78□□□□□ -1
VPS50-201ENST00000251739 TAAR3PQ9P1P4 343 aa8.78□□□□□ -1
VPS50-201ENST00000251739 NDUFAF1Q9Y375 327 aa8.78□□□□□ -1
VPS50-201ENST00000251739 GRIP1Q9Y3R0 1128 aa8.78□□□□□ -1
VPS50-201ENST00000251739 UGT2A1Q9Y4X1 527 aa8.78□□□□□ -1
VPS50-201ENST00000251739 MGRN1O60291 552 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 BCL10O95999 233 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 FSHBP01225 129 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 IGHV2-5P01817 119 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 MT-ND1P03886 318 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 ADH4P08319 380 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 RBM34P42696 430 aaKnown RBP8.77□□□□□ -1.01
VPS50-201ENST00000251739 UCP2P55851 309 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 HILS1P60008 231 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 MYBPC1Q00872 1141 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 TBC1D28Q2M2D7 210 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 VMACQ2NL98 169 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 TMEM53Q6P2H8 277 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 SLC16A14Q7RTX9 510 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 CALHM3Q86XJ0 350 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 ZNF101Q8IZC7 436 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 CPEB3Q8NE35 698 aaKnown RBP8.77□□□□□ -1.01
VPS50-201ENST00000251739 VANGL1Q8TAA9 524 aaPredicted RBP8.77□□□□□ -1.01
VPS50-201ENST00000251739 POM121L2Q96KW2 1035 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 ATP6V1G3Q96LB4 118 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 TMPRSS13Q9BYE2 586 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 BCL2L14Q9BZR8 327 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 SMURF2Q9HAU4 748 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 C20orf141Q9NUB4 165 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 SLCO1C1Q9NYB5 712 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 GPR160Q9UJ42 338 aa8.77□□□□□ -1.01
VPS50-201ENST00000251739 DOCK11Q5JSL3 2073 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 LOC100509620A0A075B734 347 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 IGKV1D-43A0A0B4J1Z2 117 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 FBP2O00757 339 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 ANGPT2O15123 496 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 TRMUO75648 421 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 OR7A10O76100 309 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 PTHP01270 115 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 ACADSP16219 412 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 AQP2P41181 271 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 WNT5AP41221 380 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 MMP15P51511 669 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 CLRN1P58418 232 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 SCGB2A2Q13296 93 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 ALKBH6Q3KRA9 238 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 PABPC1L2AQ5JQF8 200 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 FAM209AQ5JX71 171 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 AVPI1Q5T686 147 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 INTS11Q5TA45 600 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 TMEM154Q6P9G4 183 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 SHQ1Q6PI26 577 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 HDDC2Q7Z4H3 204 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 C1QL2Q7Z5L3 287 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 NKAIN4Q8IVV8 208 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 RBM15BQ8NDT2 890 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 OR1J2Q8NGS2 313 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 OR10A6Q8NH74 314 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 PFN4Q8NHR9 129 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 TMEM255BQ8WV15 326 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 SNX33Q8WV41 574 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 RASSF5Q8WWW0 418 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 C11orf40Q8WZ69 217 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 MARS2Q96GW9 593 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 POLR2J2Q9GZM3 115 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 POLR2J3Q9H1A7 115 aaKnown RBP8.76□□□□□ -1.01
VPS50-201ENST00000251739 OR51B6Q9H340 312 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 NANOGQ9H9S0 305 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 SIAEQ9HAT2 523 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 WIPI2Q9Y4P8 454 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 CACNG2Q9Y698 323 aa8.76□□□□□ -1.01
VPS50-201ENST00000251739 LOC105371242A0A075B767 164 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 IGHV1-69-2A0A0G2JMI3 117 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 IQCMA0A1B0GVH7 501 aa8.75□□□□□ -1.01
VPS50-201ENST00000251739 A0A1W2PRG6 482 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms