RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RPL4P36578 427 aaKnown RBP7.09□□□□□ -1.27
CXCR4-201ENST00000241393 PPM1FP49593 454 aaPredicted RBP7.09□□□□□ -1.27
CXCR4-201ENST00000241393 PGDP52209 483 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 OR10A3P58181 314 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 RPS11P62280 158 aaKnown RBP eCLIP7.09□□□□□ -1.27
CXCR4-201ENST00000241393 ELOCQ15369 112 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 ANGPT1Q15389 498 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 HSPB2Q16082 182 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 NTRK2Q16620 822 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 DEFB110Q30KQ9 67 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 TP53I3Q53FA7 332 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 CEP78Q5JTW2 689 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 TMEM31Q5JXX7 168 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 FAM27D1Q5T7N8 215 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 SLC22A10Q63ZE4 541 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 FCRLBQ6BAA4 426 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 SLC35F3Q8IY50 421 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 GHDCQ8N2G8 530 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 UBE2J2Q8N2K1 259 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 SMRP1Q8NCR6 262 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 YIPF5Q969M3 257 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 SCMH1Q96GD3 660 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 HYLS1Q96M11 299 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 HIST1H2AAQ96QV6 131 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 OR2M2Q96R28 347 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 ABHD1Q96SE0 405 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 LRRC61Q9BV99 259 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 ACTR6Q9GZN1 396 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 RAB33BQ9H082 229 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 LRRN3Q9H3W5 708 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 MARCH7Q9H992 704 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 KLHL1Q9NR64 748 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 LRIT1Q9P2V4 623 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 MRTO4Q9UKD2 239 aaKnown RBP7.09□□□□□ -1.27
CXCR4-201ENST00000241393 ERVK-19Q9WJR5 959 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 DTX4Q9Y2E6 619 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 RNF215Q9Y6U7 377 aa7.09□□□□□ -1.27
CXCR4-201ENST00000241393 IGKV1D-42A0A075B6H8 117 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 TRBV2A0A0J9YWF9 115 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 TLCD2A6NGC4 264 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 B4DGG1 531 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 EEF1E1O43324 174 aaKnown RBP7.08□□□□□ -1.28
CXCR4-201ENST00000241393 ZFPL1O95159 310 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 PAHP00439 452 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 CLPSP04118 112 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 GYPBP06028 91 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 TACSTD2P09758 323 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 PPP3CBP16298 524 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 ATF1P18846 271 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 EDNRAP25101 427 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 MAPK3P27361 379 aaPredicted RBP7.08□□□□□ -1.28
CXCR4-201ENST00000241393 BTCP35070 178 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 PPICP45877 212 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SLC6A8P48029 635 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 DCAF7P61962 342 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 MRPS10P82664 201 aaKnown RBP7.08□□□□□ -1.28
CXCR4-201ENST00000241393 ZNF74Q16587 644 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SLC25A35Q3KQZ1 300 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SLC36A2Q495M3 483 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 PLAC9Q5JTB6 97 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 UBE2NLQ5JXB2 153 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 ZNF684Q5T5D7 378 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 LINC01590Q5TEZ4 76 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 GPR139Q6DWJ6 353 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 VWA1Q6PCB0 445 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 IL20RBQ6UXL0 311 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 CREB3L2Q70SY1 520 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SLC16A9Q7RTY1 509 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 C17orf82Q86X59 251 aaPredicted RBP7.08□□□□□ -1.28
CXCR4-201ENST00000241393 GKN2Q86XP6 184 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SFTPA2Q8IWL1 248 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 CCDC28AQ8IWP9 274 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 ARL14Q8N4G2 192 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 TOMM5Q8N4H5 51 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 LRRC75AQ8NAA5 344 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 OR4C3Q8NH37 302 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 C15orf40Q8WUR7 153 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 THRSPQ92748 146 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 OR1F2PQ96R84 312 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 MAP3K3Q99759 626 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 PLEKHA1Q9HB21 404 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SLC2A4RGQ9NR83 387 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 MCUBQ9NWR8 336 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 STMN3Q9NZ72 180 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 MAU2Q9Y6X3 613 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 TMEM131Q92545 1883 aa7.08□□□□□ -1.28
CXCR4-201ENST00000241393 SYNDIG1LA6NDD5 238 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 OR6C68A6NDL8 312 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 NAP1L6A6NFF2 107 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 FRG2CA6NGY1 282 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 SHISA7A6NL88 538 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 AIPO00170 330 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 SULT1B1O43704 296 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 LANCL1O43813 399 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 ZNF217O75362 1048 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 ZNF432O94892 652 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 ASAH2BP0C7U1 165 aa7.07□□□□□ -1.28
CXCR4-201ENST00000241393 HKR1P10072 659 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms