RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PLPP7Q8NBV4 271 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 OR1J4Q8NGS1 313 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TSPAN32Q96QS1 320 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 GAL3ST1Q99999 423 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 PTDSS2Q9BVG9 487 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 FAM117AQ9C073 453 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 A6NCN8 305 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 H0Y8X5 98 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 ASAH2BP0C7U1 165 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 ZNF735P0CB33 412 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 RPL18Q07020 188 aaKnown RBP14.02□□□□□ -0.16
DDX55-201ENST00000238146 PAN3Q58A45 887 aaKnown RBP14.02□□□□□ -0.16
DDX55-201ENST00000238146 ZNF776Q68DI1 518 aaPredicted RBP14.02□□□□□ -0.16
DDX55-201ENST00000238146 ATG4DQ86TL0 474 aaPredicted RBP14.02□□□□□ -0.16
DDX55-201ENST00000238146 BCORP1Q8N888 145 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 OR9A4Q8NGU2 314 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 SEC22AQ96IW7 307 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 PIGMQ9H3S5 423 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 EPHA6Q9UF33 1036 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 KCNG2Q9UJ96 466 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 ERVK-19Q9WJR5 959 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 KCNK7Q9Y2U2 307 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 XIRP2A4UGR9 3374 aa14.02□□□□□ -0.16
DDX55-201ENST00000238146 SULT1C2O00338 296 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 CCSO14618 274 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 CD34P28906 385 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 PRMT2P55345 433 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 EGR4Q05215 589 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 EEF1A1P5Q5VTE0 462 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 TANGO2Q6ICL3 276 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 ZNF627Q7L945 461 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 PPP1R14AQ96A00 147 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 PHYHIPLQ96FC7 376 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 INTS14Q96SY0 518 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 MNTQ99583 582 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 EDEM2Q9BV94 578 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 SYT4Q9H2B2 425 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 SLC22A13Q9Y226 551 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 TMEM14AQ9Y6G1 99 aa14.02□□□□□ -0.17
DDX55-201ENST00000238146 SLC25A12O75746 678 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 CTSBP07858 339 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 UBE2IP63279 158 aaKnown RBP14.01□□□□□ -0.17
DDX55-201ENST00000238146 SNTB1Q13884 538 aaKnown RBP14.01□□□□□ -0.17
DDX55-201ENST00000238146 ATXN7L3Q14CW9 347 aaPredicted RBP14.01□□□□□ -0.17
DDX55-201ENST00000238146 MANEAQ5SRI9 462 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 OR1S2Q8NGQ3 325 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 PPP1R1CQ8WVI7 109 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 PDCD10Q9BUL8 212 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 ELOVL3Q9HB03 270 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 PCDHB10Q9UN67 800 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 OR10H1Q9Y4A9 318 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 COL4A2P08572 1712 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 H7C2Y5 167 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 GPR31O00270 319 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 OIP5O43482 229 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 FKTNO75072 461 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 PBX2P40425 430 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 TOMM20Q15388 145 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 WBP2NLQ6ICG8 309 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 LIN54Q6MZP7 749 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 LPCAT3Q6P1A2 487 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 ACOT7LQ6ZUV0 252 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 OR13C8Q8NGS7 320 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 OTOSQ8NHW6 89 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 COMMD9Q9P000 198 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 NOP16Q9Y3C1 178 aaKnown RBP14.01□□□□□ -0.17
DDX55-201ENST00000238146 UNC80Q8N2C7 3258 aa14.01□□□□□ -0.17
DDX55-201ENST00000238146 ARHGEF17Q96PE2 2063 aaPredicted RBP14.01□□□□□ -0.17
DDX55-201ENST00000238146 ZNF98A6NK75 572 aa14□□□□□ -0.17
DDX55-201ENST00000238146 DISC1C4P0D8 188 aa14□□□□□ -0.17
DDX55-201ENST00000238146 PNMTP11086 282 aa14□□□□□ -0.17
DDX55-201ENST00000238146 DLSTP36957 453 aa14□□□□□ -0.17
DDX55-201ENST00000238146 ATP1B3P54709 279 aa14□□□□□ -0.17
DDX55-201ENST00000238146 MEP1BQ16820 701 aa14□□□□□ -0.17
DDX55-201ENST00000238146 KLHL26Q53HC5 615 aa14□□□□□ -0.17
DDX55-201ENST00000238146 FDX2Q6P4F2 183 aa14□□□□□ -0.17
DDX55-201ENST00000238146 UQCC3Q6UW78 93 aa14□□□□□ -0.17
DDX55-201ENST00000238146 CCDC36Q8IYA8 594 aa14□□□□□ -0.17
DDX55-201ENST00000238146 PUSL1Q8N0Z8 303 aaKnown RBP14□□□□□ -0.17
DDX55-201ENST00000238146 BPIFB2Q8N4F0 458 aa14□□□□□ -0.17
DDX55-201ENST00000238146 PATE1Q8WXA2 126 aa14□□□□□ -0.17
DDX55-201ENST00000238146 ZNF524Q96C55 264 aa14□□□□□ -0.17
DDX55-201ENST00000238146 SLC41A2Q96JW4 573 aa14□□□□□ -0.17
DDX55-201ENST00000238146 TSNAXQ99598 290 aaKnown RBP14□□□□□ -0.17
DDX55-201ENST00000238146 ZMAT3Q9HA38 289 aaKnown RBP14□□□□□ -0.17
DDX55-201ENST00000238146 SLC39A1Q9NY26 324 aa14□□□□□ -0.17
DDX55-201ENST00000238146 GDE1Q9NZC3 331 aa14□□□□□ -0.17
DDX55-201ENST00000238146 NDRG3Q9UGV2 375 aa14□□□□□ -0.17
DDX55-201ENST00000238146 MSRAQ9UJ68 235 aa14□□□□□ -0.17
DDX55-201ENST00000238146 FARSAQ9Y285 508 aaKnown RBP14□□□□□ -0.17
DDX55-201ENST00000238146 TMEM218A2RU14 115 aa14□□□□□ -0.17
DDX55-201ENST00000238146 HSPB2A8KAH6 182 aa14□□□□□ -0.17
DDX55-201ENST00000238146 ZNF736B4DX44 427 aaPredicted RBP14□□□□□ -0.17
DDX55-201ENST00000238146 PRKNO60260 465 aaPredicted RBP14□□□□□ -0.17
DDX55-201ENST00000238146 PNPP00491 289 aa14□□□□□ -0.17
DDX55-201ENST00000238146 HLA-AP01891 365 aaKnown RBP14□□□□□ -0.17
DDX55-201ENST00000238146 LIPCP11150 499 aa14□□□□□ -0.17
DDX55-201ENST00000238146 ZNF28P17035 718 aa14□□□□□ -0.17
DDX55-201ENST00000238146 FCARP24071 287 aa14□□□□□ -0.17
DDX55-201ENST00000238146 BDKRB2P30411 391 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms