RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SLC25A47Q6Q0C1 308 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 RRM2BQ7LG56 351 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 DPPA2Q7Z7J5 298 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
GPN3-201ENST00000228827 FAM86B1Q8N7N1 296 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 ICA1LQ8NDH6 482 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 NABP1Q96AH0 204 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 RBP7Q96R05 134 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 ALG12Q9BV10 488 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 NMNAT1Q9HAN9 279 aaPredicted RBP12.23□□□□□ -0.45
GPN3-201ENST00000228827 SIAEQ9HAT2 523 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 CCNB1IP1Q9NPC3 277 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 HIVEP2P31629 2446 aa12.23□□□□□ -0.45
GPN3-201ENST00000228827 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 GMNNO75496 209 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 DIRAS1O95057 198 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 PTHP01270 115 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 IGHMP01871 453 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 LCKP06239 509 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 H1F0P07305 194 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 MMP7P09237 267 aaPredicted RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 NR2C1P13056 603 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 APEHP13798 732 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 CCNOP22674 350 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 APLNRP35414 380 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 RPL4P36578 427 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 SLC9A3P48764 834 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 EVX1P49640 407 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 ERVS71-1P61550 626 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 MRPS34P82930 218 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 RGS7BPQ6MZT1 257 aaPredicted RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 OR1J2Q8NGS2 313 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 ZNF519Q8TB69 540 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 SLC7A13Q8TCU3 470 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 UBASH3BQ8TF42 649 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 FAM46AQ96IP4 442 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 SMURF2Q9HAU4 748 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 FAM32AQ9Y421 112 aaKnown RBP12.22□□□□□ -0.45
GPN3-201ENST00000228827 CR1P17927 2039 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 CSPG4Q6UVK1 2322 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 PLCE1Q9P212 2302 aa12.22□□□□□ -0.45
GPN3-201ENST00000228827 A0A1W2PPL8 197 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 SLC22A23A1A5C7 686 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 A6NIZ1 184 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 CLPTM1O96005 669 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 NAT2P11245 290 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 ZNF32P17041 273 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 LAP3P28838 519 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 MSX2P35548 267 aaPredicted RBP12.21□□□□□ -0.45
GPN3-201ENST00000228827 RAP1BP61224 184 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 RAP1AP62834 184 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 ZBED5Q49AG3 693 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 THEM4Q5T1C6 240 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 FAM205BPQ63HN1 556 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 PODNL1Q6PEZ8 512 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 AKR7LQ8NHP1 331 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 LRMDAQ9H2I8 198 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 C1orf198Q9H425 327 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 DCAF13Q9NV06 445 aaKnown RBP12.21□□□□□ -0.45
GPN3-201ENST00000228827 ARL8BQ9NVJ2 186 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 NDUFAF4Q9P032 175 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 TAAR3PQ9P1P4 343 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 SAMD4AQ9UPU9 718 aaKnown RBP12.21□□□□□ -0.45
GPN3-201ENST00000228827 ADAM18Q9Y3Q7 739 aa12.21□□□□□ -0.45
GPN3-201ENST00000228827 LRP5LA4QPB2 252 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 MGRN1O60291 552 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.46
GPN3-201ENST00000228827 STOMP27105 288 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 GZMKP49863 264 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 UCP2P55851 309 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 NKPD1Q17RQ9 610 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 CHRFAM7AQ494W8 412 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ANKDD1AQ495B1 522 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 TMPRSS11FQ6ZWK6 438 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 HIPK1Q86Z02 1210 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ZNF786Q8N393 782 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ARIH2OSQ8N7S6 290 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ZNF540Q8NDQ6 660 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 OR52J3Q8NH60 311 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 C7orf34Q96L11 122 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ANKRD19PQ9H560 264 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 CHODLQ9H9P2 273 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 GRHPRQ9UBQ7 328 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 TMEM5Q9Y2B1 443 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 ARL2BPQ9Y2Y0 163 aa12.21□□□□□ -0.46
GPN3-201ENST00000228827 HEATR1Q9H583 2144 aaKnown RBP12.2□□□□□ -0.46
GPN3-201ENST00000228827 TRBV4-1A0A0J9YWV2 114 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 LOC100289279A0A1B0GTE1 492 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 A0A1W2PRQ8 180 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 SNAP29O95721 258 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 HPXP02790 462 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 ZNF23P17027 643 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 RHCEP18577 417 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 GUCA1AP43080 201 aaPredicted RBP12.2□□□□□ -0.46
GPN3-201ENST00000228827 RAD52P43351 418 aa12.2□□□□□ -0.46
GPN3-201ENST00000228827 KLF3P57682 345 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms