RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 EXOGQ9Y2C4 368 aaKnown RBP12.36□□□□□ -0.43
SEC61B-201ENST00000223641 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
SEC61B-201ENST00000223641 MYO7BQ6PIF6 2116 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 FAM171A2A8MVW0 826 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 A8MXE2 369 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
SEC61B-201ENST00000223641 ZNF587BE7ETH6 402 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 J3QRE1 110 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 XPNPEP2O43895 674 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 TFP02787 698 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 SCG5P05408 212 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 ITGA5P08648 1049 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 COX5AP20674 150 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 MPGP29372 298 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 NUDT6P53370 316 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
SEC61B-201ENST00000223641 MRPS34P82930 218 aaKnown RBP12.35□□□□□ -0.43
SEC61B-201ENST00000223641 ADORA2A-AS1P86434 159 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 FAPQ12884 760 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 PCK2Q16822 640 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 C4orf17Q53FE4 359 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 TEX30Q5JUR7 227 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 LCN1P1Q5VSP4 162 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 B3GLCTQ6Y288 498 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 TIGD4Q8IY51 512 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 BPIFB6Q8NFQ5 453 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 NSMAFQ92636 917 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 GGHQ92820 318 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 RBM24Q9BX46 236 aaKnown RBP12.35□□□□□ -0.43
SEC61B-201ENST00000223641 DUSP21Q9H596 190 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 AMBNQ9NP70 447 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 CNOT2Q9NZN8 540 aaKnown RBP12.35□□□□□ -0.43
SEC61B-201ENST00000223641 PSORS1C1Q9UIG5 152 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 NBASA2RRP1 2371 aa12.35□□□□□ -0.43
SEC61B-201ENST00000223641 DVL2O14641 736 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 KRT33AO76009 404 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 GPANK1O95872 356 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 SBK2P0C263 348 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 NPR2P20594 1047 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 ZNF84P51523 738 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 SLC35A2P78381 396 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 RAB40BQ12829 278 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 POU4F2Q12837 409 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 FAM27BQ5VT28 67 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 MTFR2Q6P444 385 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 ZNF474Q6S9Z5 364 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 LYPD4Q6UWN0 246 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 BEND4Q6ZU67 534 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 MRGPRGQ86SM5 289 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 FJX1Q86VR8 437 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 ZNF786Q8N393 782 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 ZNF511Q8NB15 262 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 RELL2Q8NC24 303 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 OR6K6Q8NGW6 343 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 PRR7Q8TB68 274 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 LGALS12Q96DT0 336 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 ZMYND19Q96E35 227 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 RNFT2Q96EX2 444 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 SIGLEC11Q96RL6 698 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 FOXB1Q99853 325 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 OPN3Q9H1Y3 402 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 RERGLQ9H628 205 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 ADGRL4Q9HBW9 690 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 FGF20Q9NP95 211 aaPredicted RBP12.34□□□□□ -0.43
SEC61B-201ENST00000223641 POLE4Q9NR33 117 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 TMEM38BQ9NVV0 291 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 TAS2R16Q9NYV7 291 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 COMMD3-BMI1R4GMX3 469 aa12.34□□□□□ -0.43
SEC61B-201ENST00000223641 FAM208BQ5VWN6 2430 aa12.33□□□□□ -0.43
SEC61B-201ENST00000223641 LRRTM2O43300 516 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 MPZL1O95297 269 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 BMP5P22003 454 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 IGHV1-2P23083 117 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 CDAP32320 146 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 CHN2P52757 468 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 RPS7P62081 194 aaKnown RBP12.33□□□□□ -0.44
SEC61B-201ENST00000223641 LSM6P62312 80 aaKnown RBP12.33□□□□□ -0.44
SEC61B-201ENST00000223641 P2RY6Q15077 328 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 KLHL22Q53GT1 634 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
SEC61B-201ENST00000223641 C11orf40Q8WZ69 217 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 RHNO1Q9BSD3 238 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 WDR76Q9H967 626 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 SIAEQ9HAT2 523 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 PAK1IP1Q9NWT1 392 aaPredicted RBP12.33□□□□□ -0.44
SEC61B-201ENST00000223641 SCN3BQ9NY72 215 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 TPRKBQ9Y3C4 175 aa12.33□□□□□ -0.44
SEC61B-201ENST00000223641 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 EFCAB10A6NFE3 127 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 TVP23AA6NH52 213 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 EIF4E1BA6NMX2 242 aaKnown RBP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 FAM20BO75063 409 aa12.32□□□□□ -0.44
SEC61B-201ENST00000223641 SMNDC1O75940 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEC61B-201ENST00000223641 IGHA1P01876 353 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms