RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CTXN2P0C2S0 81 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 TRA2AQ13595 282 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRPS1-201ENST00000220888 OR1C1Q15619 314 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 PAQR9Q6ZVX9 377 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 BPIFCQ8NFQ6 507 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 UBTD2Q8WUN7 234 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 OR51J1Q9H342 316 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 ONECUT1Q9UBC0 465 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 DAPP1Q9UN19 280 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 SPEF2Q9C093 1822 aa9.68□□□□□ -0.86
TRPS1-201ENST00000220888 TRBV4-1A0A0J9YWV2 114 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CLDN24A6NM45 220 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 NCBP2LA6PVI3 153 aaKnown RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PPIHO43447 177 aaKnown RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ST6GAL1P15907 406 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 INSM1Q01101 510 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 FLI1Q01543 452 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 FGFBP1Q14512 234 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 GLIPR1L1Q6UWM5 242 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CDC20BQ86Y33 519 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 SKA3Q8IX90 412 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CLDN22Q8N7P3 220 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 BAHD1Q8TBE0 780 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ZNF251Q9BRH9 671 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 WBP1LQ9NX94 342 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 TMEM82A0PJX8 343 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PRRT4C9JH25 899 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 FBXO24O75426 580 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 IGFBP1P08833 259 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CSF3P09919 207 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 TFPTP0C1Z6 253 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ERHP84090 104 aaKnown RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 FOXK2Q01167 660 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ALKBH1Q13686 389 aaKnown RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CRMP1Q14194 572 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 C17orf107Q6ZR85 190 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 OR10AD1Q8NGE0 317 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 SARGQ9BW04 601 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 NT5DC2Q9H857 520 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 NRIP3Q9NQ35 241 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PUS1Q9Y606 427 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 M0R296 226 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 NAGAP17050 411 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 HNF1AP20823 631 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ECI1P42126 302 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 HENMT1Q5T8I9 393 aaKnown RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 RSPO2Q6UXX9 243 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 BATF2Q8N1L9 274 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PRR7Q8TB68 274 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 OR2B2Q9GZK3 357 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CXorf36Q9H7Y0 433 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 A0A087WZY1 265 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 A6NIN4 97 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 GABRPO00591 440 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 SLC16A6O15403 523 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 HPGDSO60760 199 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 CBR3O75828 277 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 EVI2BP34910 448 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PPP2CBP62714 309 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PPP2CAP67775 309 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 MLLT11Q13015 90 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 TFAP2EQ6VUC0 442 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ZNF534Q76KX8 674 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PGBD5Q8N414 524 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 ZNF511Q8NB15 262 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 OR51F2Q8NH61 342 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 PAQR8Q8TEZ7 354 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 DPF1Q92782 380 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 WBP2Q969T9 261 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 LHPPQ9H008 270 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 TCEAL2Q9H3H9 227 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-201ENST00000220888 EMC7Q9NPA0 242 aa9.67□□□□□ -0.86
TRPS1-201ENST00000220888 LMO7DNF2Z398 122 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 PPP6CO00743 305 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 XRCC2O43543 280 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 NUDT7P0C024 238 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 SFTPCP11686 197 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 APOOLQ6UXV4 268 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 IDO2Q6ZQW0 420 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 GDF7Q7Z4P5 450 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 VRK3Q8IV63 474 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 SLC16A11Q8NCK7 471 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 OR51H1Q8NH63 302 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 PTTG3PQ9NZH4 202 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 RAB22AQ9UL26 194 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 PIK3C2AO00443 1686 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 B3GALT4O96024 378 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 PPICP45877 212 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 ZNF91Q05481 1191 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 TPBGQ13641 420 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 ADGRG3Q86Y34 549 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 THNSL2Q86YJ6 484 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 OR2AK2Q8NG84 335 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 ST8SIA1Q92185 356 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 FGF14Q92915 247 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 TSLPQ969D9 159 aa9.66□□□□□ -0.86
TRPS1-201ENST00000220888 PINX1Q96BK5 328 aaKnown RBP9.66□□□□□ -0.86
TRPS1-201ENST00000220888 NEURL3Q96EH8 262 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms